Difference between revisions of "CPD-17264"

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(Created page with "Category:gene == Gene SJ02434 == * transcription-direction: ** negative * right-end-position: ** 99768 * left-end-position: ** 83548 * centisome-position: ** 15.419825...")
(Created page with "Category:gene == Gene SJ13891 == * transcription-direction: ** positive * right-end-position: ** 16515 * left-end-position: ** 11920 * centisome-position: ** 3.6172292...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02434 ==
+
== Gene SJ13891 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 99768
+
** 16515
 
* left-end-position:
 
* left-end-position:
−
** 83548
+
** 11920
 
* centisome-position:
 
* centisome-position:
−
** 15.419825    
+
** 3.6172292    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[6PFRUCTPHOS-RXN]]
+
* [[3.4.25.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PFK_]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=16515}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=11920}}
−
== Pathway(s) associated ==
+
{{#set: centisome-position=3.6172292   }}
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7385]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=99768}}
 
−
{{#set: left-end-position=83548}}
 
−
{{#set: centisome-position=15.419825   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
 

Revision as of 09:28, 27 August 2019

Gene SJ13891

  • transcription-direction:
    • positive
  • right-end-position:
    • 16515
  • left-end-position:
    • 11920
  • centisome-position:
    • 3.6172292

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17264&oldid=33142"