Difference between revisions of "CPD-17275"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:metabolite == Metabolite CPD-17275 == * common-name: ** 7-oxolithocholate * smiles: ** cc([ch]3(cc[ch]4([ch]2(c(=o)c[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34)))))ccc(=o)[o-...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] ==
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== Metabolite CPD-17275 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** 1,3-beta-d-glucan synthase
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** 7-oxolithocholate
* ec-number:
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* smiles:
** [http://enzyme.expasy.org/EC/2.4.1.34 ec-2.4.1.34]
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** cc([ch]3(cc[ch]4([ch]2(c(=o)c[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34)))))ccc(=o)[o-]
== Reaction formula ==
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* inchi-key:
* 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[UDP]][c]
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** dxocdbgwdzayrq-aurdafmxsa-m
== Gene(s) associated with this reaction  ==
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* molecular-weight:
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** 389.554
* Gene: [[SJ05913]]
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== Reaction(s) known to consume the compound ==
** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-16033]]
** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=7-oxolithocholate}}
* Gene: [[SJ17989]]
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{{#set: inchi-key=inchikey=dxocdbgwdzayrq-aurdafmxsa-m}}
** Category: [[annotation]]
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{{#set: molecular-weight=389.554}}
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ07490]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14968]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14966]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05912]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14965]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14967]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
== Pathway(s) ==
 
* [[PWY-6773]], 1,3-&beta;-D-glucan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6773 PWY-6773]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03118 R03118]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P38631 P38631]
 
** [http://www.uniprot.org/uniprot/P40989 P40989]
 
** [http://www.uniprot.org/uniprot/Q10287 Q10287]
 
** [http://www.uniprot.org/uniprot/P38678 P38678]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=1,3-beta-d-glucan synthase}}
 
{{#set: ec-number=ec-2.4.1.34}}
 
{{#set: nb gene associated=8}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:18, 18 March 2021

Metabolite CPD-17275

  • common-name:
    • 7-oxolithocholate
  • smiles:
    • cc([ch]3(cc[ch]4([ch]2(c(=o)c[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34)))))ccc(=o)[o-]
  • inchi-key:
    • dxocdbgwdzayrq-aurdafmxsa-m
  • molecular-weight:
    • 389.554

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality