Difference between revisions of "CPD-17282"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** left-to-right * common-name: ** xanthosine-5'-p...")
(Created page with "Category:metabolite == Metabolite UDP-N-ACETYLMURAMATE == * common-name: ** udp-n-acetyl-α-d-muramate * smiles: ** cc(c([o-])=o)oc3(c(o)c(co)oc(op(=o)([o-])op(=o)([o...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
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== Metabolite UDP-N-ACETYLMURAMATE ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** xanthosine-5'-phosphate:ammonia ligase (amp-forming)
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** udp-n-acetyl-α-d-muramate
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== Reaction formula ==
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* smiles:
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* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
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** cc(c([o-])=o)oc3(c(o)c(co)oc(op(=o)([o-])op(=o)([o-])occ1(oc(c(o)c(o)1)n2(c=cc(=o)nc(=o)2)))c(nc(c)=o)3)
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== Gene(s) associated with this reaction  ==
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* inchi-key:
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* Gene: [[SJ08788]]
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** nqbrvzndbbmblj-mqtlhlsbsa-k
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** Category: [[annotation]]
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* molecular-weight:
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** 676.397
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* Gene: [[SJ22386]]
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== Reaction(s) known to consume the compound ==
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=udp-n-acetyl-α-d-muramate}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: inchi-key=inchikey=nqbrvzndbbmblj-mqtlhlsbsa-k}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=676.397}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18302 18302]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=xanthosine-5'-phosphate:ammonia ligase (amp-forming)}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 20:36, 18 December 2020

Metabolite UDP-N-ACETYLMURAMATE

  • common-name:
    • udp-n-acetyl-α-d-muramate
  • smiles:
    • cc(c([o-])=o)oc3(c(o)c(co)oc(op(=o)([o-])op(=o)([o-])occ1(oc(c(o)c(o)1)n2(c=cc(=o)nc(=o)2)))c(nc(c)=o)3)
  • inchi-key:
    • nqbrvzndbbmblj-mqtlhlsbsa-k
  • molecular-weight:
    • 676.397

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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