Difference between revisions of "CPD-17329"

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(Created page with "Category:gene == Gene SJ20140 == * transcription-direction: ** negative * right-end-position: ** 71287 * left-end-position: ** 56133 * centisome-position: ** 26.430706...")
(Created page with "Category:metabolite == Metabolite CPD-17329 == * common-name: ** 3-oxo-tetracosatetraenoyl-coa * smiles: ** cccccc=ccc=ccc=ccc=ccccccc(=o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)co...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ20140 ==
+
== Metabolite CPD-17329 ==
* transcription-direction:
+
* common-name:
** negative
+
** 3-oxo-tetracosatetraenoyl-coa
* right-end-position:
+
* smiles:
** 71287
+
** cccccc=ccc=ccc=ccc=ccccccc(=o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
* left-end-position:
+
* inchi-key:
** 56133
+
** wsalicwlarpulc-gjykhrjnsa-j
* centisome-position:
+
* molecular-weight:
** 26.430706   
+
** 1120.05
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-17109]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
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{{#set: common-name=3-oxo-tetracosatetraenoyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=wsalicwlarpulc-gjykhrjnsa-j}}
* [[RXN-1884]]
+
{{#set: molecular-weight=1120.05}}
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7204]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7282]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-882]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=71287}}
 
{{#set: left-end-position=56133}}
 
{{#set: centisome-position=26.430706    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-17329

  • common-name:
    • 3-oxo-tetracosatetraenoyl-coa
  • smiles:
    • cccccc=ccc=ccc=ccc=ccccccc(=o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
  • inchi-key:
    • wsalicwlarpulc-gjykhrjnsa-j
  • molecular-weight:
    • 1120.05

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality