Difference between revisions of "CPD-17348"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] == * direction: ** left-to-right * common-name: ** ser...")
 
(Created page with "Category:metabolite == Metabolite CPD-17348 == * common-name: ** (2e, 11z,14z)-icosa-2,11,14-trienoyl-coa * smiles: ** cccccc=ccc=ccccccccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] ==
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== Metabolite CPD-17348 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** serine acetyltransferase
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** (2e, 11z,14z)-icosa-2,11,14-trienoyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.3.1.30 ec-2.3.1.30]
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** cccccc=ccc=ccccccccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[ACETYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[ACETYLSERINE]][c] '''+''' 1 [[CO-A]][c]
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** jlhullpftgligf-dbyuabgnsa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** 1051.975
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* Gene: [[SJ14691]]
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== Reaction(s) known to consume the compound ==
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** Category: [[annotation]]
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* [[RXN-16097]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[RXN-16096]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=(2e, 11z,14z)-icosa-2,11,14-trienoyl-coa}}
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* Gene: [[SJ15518]]
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{{#set: inchi-key=inchikey=jlhullpftgligf-dbyuabgnsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1051.975}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ00718]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ14890]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[PWY-7870]], L-cysteine biosynthesis VII (from S-sulfo-L-cysteine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7870 PWY-7870]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7274]], D-cycloserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7274 PWY-7274]
 
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** '''1''' reactions found over '''6''' reactions in the full pathway
 
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* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6936]], seleno-amino acid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q39533 Q39533]
 
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** [http://www.uniprot.org/uniprot/Q06750 Q06750]
 
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** [http://www.uniprot.org/uniprot/P71405 P71405]
 
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** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86]
 
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** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6]
 
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** [http://www.uniprot.org/uniprot/P23145 P23145]
 
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** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8]
 
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** [http://www.uniprot.org/uniprot/P43886 P43886]
 
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** [http://www.uniprot.org/uniprot/P32003 P32003]
 
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** [http://www.uniprot.org/uniprot/P29847 P29847]
 
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** [http://www.uniprot.org/uniprot/Q42588 Q42588]
 
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** [http://www.uniprot.org/uniprot/Q39218 Q39218]
 
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** [http://www.uniprot.org/uniprot/Q42538 Q42538]
 
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** [http://www.uniprot.org/uniprot/P74089 P74089]
 
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** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8]
 
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** [http://www.uniprot.org/uniprot/Q8S895 Q8S895]
 
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** [http://www.uniprot.org/uniprot/P93544 P93544]
 
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** [http://www.uniprot.org/uniprot/O69218 O69218]
 
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** [http://www.uniprot.org/uniprot/O32979 O32979]
 
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** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=serine acetyltransferase}}
 
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{{#set: ec-number=ec-2.3.1.30}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021

Metabolite CPD-17348

  • common-name:
    • (2e, 11z,14z)-icosa-2,11,14-trienoyl-coa
  • smiles:
    • cccccc=ccc=ccccccccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • jlhullpftgligf-dbyuabgnsa-j
  • molecular-weight:
    • 1051.975

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17348&oldid=139804"