Difference between revisions of "CPD-17351"

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(Created page with "Category:gene == Gene SJ14817 == * transcription-direction: ** negative * right-end-position: ** 292182 * left-end-position: ** 257886 * centisome-position: ** 64.258804...")
(Created page with "Category:gene == Gene SJ16279 == * transcription-direction: ** positive * right-end-position: ** 5692 * left-end-position: ** 145 * centisome-position: ** 2.5283349 ==...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14817 ==
+
== Gene SJ16279 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 292182
+
** 5692
 
* left-end-position:
 
* left-end-position:
−
** 257886
+
** 145
 
* centisome-position:
 
* centisome-position:
−
** 64.258804    
+
** 2.5283349    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.1.68-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[6.3.5.7-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[AMIDASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRAZIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[R311-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14727]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14728]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17608]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNN-404]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6352]]
+
* [[PWY-5921]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6351]]
+
* [[ARGDEG-V-PWY]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7308]]
−
{{#set: right-end-position=292182}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=257886}}
+
* [[PWY-5025]]
−
{{#set: centisome-position=64.258804   }}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3161]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-581]]
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=5692}}
 +
{{#set: left-end-position=145}}
 +
{{#set: centisome-position=2.5283349   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=6}}

Revision as of 09:27, 27 August 2019

Gene SJ16279

  • transcription-direction:
    • positive
  • right-end-position:
    • 5692
  • left-end-position:
    • 145
  • centisome-position:
    • 2.5283349

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5921
    • 2 reactions found over 4 reactions in the full pathway
  • ARGDEG-V-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7308
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5025
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3161
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-581
    • 5 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17351&oldid=32512"