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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == | + | == Metabolite CPD-17352 == |
| − | * direction: | + | * smiles: |
| − | ** reversible | + | ** ccc=ccc=ccc=ccccccccccc(=o)[a glycerolipid] |
| | * common-name: | | * common-name: |
| − | ** shikimate kinase | + | ** a [glycerolipid]-(11z,14z,17z)-icosatrienoate |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.71 ec-2.7.1.71]
| + | * [[RXN-16101]] |
| − | == Reaction formula == | + | == Reaction(s) known to produce the compound == |
| − | * 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SHIKIMATE-5P]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=a [glycerolipid]-(11z,14z,17z)-icosatrienoate}} |
| − | * Gene: [[SJ04949]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ10493]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ05909]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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| − | ** '''6''' reactions found over '''5''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | == External links == | |
| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13124 13124]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
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| − | ** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
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| − | ** [http://www.uniprot.org/uniprot/P07547 P07547]
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| − | ** [http://www.uniprot.org/uniprot/P08566 P08566]
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| − | ** [http://www.uniprot.org/uniprot/P43880 P43880]
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| − | ** [http://www.uniprot.org/uniprot/P63600 P63600]
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| − | ** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
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| − | ** [http://www.uniprot.org/uniprot/P37944 P37944]
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| − | ** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
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| − | ** [http://www.uniprot.org/uniprot/P10880 P10880]
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| − | ** [http://www.uniprot.org/uniprot/Q00497 Q00497]
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| − | ** [http://www.uniprot.org/uniprot/P34003 P34003]
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| − | ** [http://www.uniprot.org/uniprot/P43906 P43906]
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| − | ** [http://www.uniprot.org/uniprot/P72796 P72796]
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=shikimate kinase}} | |
| − | {{#set: ec-number=ec-2.7.1.71}}
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| − | {{#set: nb gene associated=3}}
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| − | {{#set: nb pathway associated=1}}
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| − | {{#set: reconstruction category=orthology|annotation}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
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