Difference between revisions of "CPD-17382"

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(Created page with "Category:gene == Gene SJ11059 == * transcription-direction: ** positive * right-end-position: ** 734801 * left-end-position: ** 724502 * centisome-position: ** 92.239784...")
(Created page with "Category:metabolite == Metabolite CPD-17382 == * common-name: ** (3r)-hydroxy-tetracosapentaenoyl-coa * smiles: ** ccc=ccc=ccc=ccc=ccc=ccccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ11059 ==
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== Metabolite CPD-17382 ==
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* transcription-direction:
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* common-name:
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** positive
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** (3r)-hydroxy-tetracosapentaenoyl-coa
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* right-end-position:
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* smiles:
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** 734801
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** ccc=ccc=ccc=ccc=ccc=ccccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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* left-end-position:
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* inchi-key:
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** 724502
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** drqaurckckdinz-kpyxopptsa-j
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* centisome-position:
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* molecular-weight:
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** 92.239784   
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** 1120.05
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-16130]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN0-1461]]
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* [[RXN-16129]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=(3r)-hydroxy-tetracosapentaenoyl-coa}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=drqaurckckdinz-kpyxopptsa-j}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=1120.05}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY0-1415]]
 
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** '''5''' reactions found over '''4''' reactions in the full pathway
 
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* [[CHLOROPHYLL-SYN]]
 
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** '''6''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7159]]
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
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* [[HEME-BIOSYNTHESIS-II]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=734801}}
 
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{{#set: left-end-position=724502}}
 
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{{#set: centisome-position=92.239784    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=1}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-17382

  • common-name:
    • (3r)-hydroxy-tetracosapentaenoyl-coa
  • smiles:
    • ccc=ccc=ccc=ccc=ccc=ccccccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
  • inchi-key:
    • drqaurckckdinz-kpyxopptsa-j
  • molecular-weight:
    • 1120.05

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17382&oldid=136840"