Difference between revisions of "CPD-17386"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] == * direction: ** reversible * common-name: ** 3-isopropylmalate dehydratase **...")
 
(Created page with "Category:metabolite == Metabolite CPD-17386 == * common-name: ** (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa * smiles: ** ccc=ccc=ccc=ccc=ccc=ccc=cccc=cc(sccnc(=o)c...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] ==
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== Metabolite CPD-17386 ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** 3-isopropylmalate dehydratase
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** (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa
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** (2r,3s)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)
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* smiles:
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* synonymous:
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** ccc=ccc=ccc=ccc=ccc=ccc=cccc=cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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** (2r,3s)-3-isopropylmalate hydro-lyase
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* inchi-key:
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** β-isopropylmalate dehydratase
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** nvowzibkqiwtdg-aducosnasa-j
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** 3-isopropylmalate hydro-lyase
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* molecular-weight:
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** α-isopropylmalate isomerase
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** 1100.019
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== Reaction formula ==
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== Reaction(s) known to consume the compound ==
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* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c]
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* [[RXN-16135]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ22396]]
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* [[RXN-16134]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=(2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=nvowzibkqiwtdg-aducosnasa-j}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=1100.019}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ09771]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=(2r,3s)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)|3-isopropylmalate dehydratase}}
 
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{{#set: synonymous=&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase|(2r,3s)-3-isopropylmalate hydro-lyase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite CPD-17386

  • common-name:
    • (2e,6z,9z,12z,15z,18z,21z)-tetracosaheptaenoyl-coa
  • smiles:
    • ccc=ccc=ccc=ccc=ccc=ccc=cccc=cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
  • inchi-key:
    • nvowzibkqiwtdg-aducosnasa-j
  • molecular-weight:
    • 1100.019

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17386&oldid=138922"