Difference between revisions of "CPD-17401"
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(Created page with "Category:gene == Gene SJ00450 == * transcription-direction: ** negative * right-end-position: ** 70209 * left-end-position: ** 65455 * centisome-position: ** 39.21692...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12479 RXN-12479] == * direction: ** left-to-right * common-name: ** adenosine4 in trnahis 2'-o-...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12479 RXN-12479] == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
| − | * | + | * common-name: |
| − | ** | + | ** adenosine4 in trnahis 2'-o-methyltransferase |
| − | + | * ec-number: | |
| − | * | + | ** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225] |
| − | + | == Reaction formula == | |
| − | ** | + | * 1 [[His-tRNA-Adenosine4]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[His-tRNA-2-O-MeAdenosine4]][c] '''+''' 1 [[PROTON]][c] |
| − | == | + | == Gene(s) associated with this reaction == |
| − | * [[S | + | * Gene: [[SJ07716]] |
| − | == | ||
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | {{#set: | + | == Pathway(s) == |
| − | {{#set: | + | * [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829] |
| − | {{#set: | + | ** '''11''' reactions found over '''15''' reactions in the full pathway |
| − | {{#set: | + | == Reconstruction information == |
| − | {{#set: | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: | + | == External links == |
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43197 43197] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=adenosine4 in trnahis 2'-o-methyltransferase}} | ||
| + | {{#set: ec-number=ec-2.1.1.225}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=1}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 09:28, 27 August 2019
Contents
Reaction RXN-12479
- direction:
- left-to-right
- common-name:
- adenosine4 in trnahis 2'-o-methyltransferase
- ec-number:
Reaction formula
- 1 His-tRNA-Adenosine4[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 His-tRNA-2-O-MeAdenosine4[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ07716
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6829, tRNA methylation (yeast): PWY-6829
- 11 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
