Difference between revisions of "CPD-17492"

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(Created page with "Category:gene == Gene SJ08036 == * transcription-direction: ** positive * right-end-position: ** 147245 * left-end-position: ** 102991 * centisome-position: ** 23.121443...")
(Created page with "Category:metabolite == Metabolite CPD-17492 == * common-name: ** (r)-2-hydroxy-4-methylpentanoate * smiles: ** cc(c)cc(c([o-])=o)o * inchi-key: ** lvrftazaxqpqhi-rxmqykeds...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ08036 ==
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== Metabolite CPD-17492 ==
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* transcription-direction:
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* common-name:
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** positive
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** (r)-2-hydroxy-4-methylpentanoate
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* right-end-position:
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* smiles:
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** 147245
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** cc(c)cc(c([o-])=o)o
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* left-end-position:
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* inchi-key:
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** 102991
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** lvrftazaxqpqhi-rxmqykedsa-m
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* centisome-position:
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* molecular-weight:
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** 23.121443   
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** 131.151
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17525]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[ATPASE-RXN]]
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{{#set: common-name=(r)-2-hydroxy-4-methylpentanoate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=lvrftazaxqpqhi-rxmqykedsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=131.151}}
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-11135]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6797]]
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6147]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7539]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=147245}}
 
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{{#set: left-end-position=102991}}
 
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{{#set: centisome-position=23.121443    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=8}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-17492

  • common-name:
    • (r)-2-hydroxy-4-methylpentanoate
  • smiles:
    • cc(c)cc(c([o-])=o)o
  • inchi-key:
    • lvrftazaxqpqhi-rxmqykedsa-m
  • molecular-weight:
    • 131.151

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17492&oldid=136983"