Difference between revisions of "CPD-178"

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(Created page with "Category:gene == Gene SJ12469 == * transcription-direction: ** negative * right-end-position: ** 229300 * left-end-position: ** 207110 * centisome-position: ** 27.633825...")
(Created page with "Category:metabolite == Metabolite PYRIDOXAL_PHOSPHATE == * common-name: ** pyridoxal 5'-phosphate * smiles: ** cc1(n=cc(=c(c=1o)c=o)cop(=o)([o-])[o-]) * inchi-key: ** ngvd...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ12469 ==
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== Metabolite PYRIDOXAL_PHOSPHATE ==
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* transcription-direction:
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* common-name:
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** negative
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** pyridoxal 5'-phosphate
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* right-end-position:
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* smiles:
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** 229300
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** cc1(n=cc(=c(c=1o)c=o)cop(=o)([o-])[o-])
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* left-end-position:
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* inchi-key:
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** 207110
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** ngvdgcnfywlifo-uhfffaoysa-l
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* centisome-position:
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* molecular-weight:
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** 27.633825   
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** 245.128
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[3.1.3.74-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PMPOXI-RXN]]
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* [[3.6.4.5-RXN]]
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* [[PNPOXI-RXN]]
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** Category: [[annotation]]
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* [[PYRIDOXKIN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11322]]
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* [[ATPASE-RXN]]
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* [[RXN-12590]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=pyridoxal 5'-phosphate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=ngvdgcnfywlifo-uhfffaoysa-l}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=245.128}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=229300}}
 
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{{#set: left-end-position=207110}}
 
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{{#set: centisome-position=27.633825    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 20:33, 18 December 2020

Metabolite PYRIDOXAL_PHOSPHATE

  • common-name:
    • pyridoxal 5'-phosphate
  • smiles:
    • cc1(n=cc(=c(c=1o)c=o)cop(=o)([o-])[o-])
  • inchi-key:
    • ngvdgcnfywlifo-uhfffaoysa-l
  • molecular-weight:
    • 245.128

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-178&oldid=46930"