Difference between revisions of "CPD-17814"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** left-to-right * common-name: ** 2-methyl-6-phytyl-1,4-benzoqu...")
(Created page with "Category:metabolite == Metabolite CPD-17814 == * common-name: ** (11z)-(s)-3-hydroxyhexadec-11-enoyl-coa * smiles: ** ccccc=ccccccccc(cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
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== Metabolite CPD-17814 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
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** (11z)-(s)-3-hydroxyhexadec-11-enoyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.1.1.295 ec-2.1.1.295]
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** ccccc=ccccccccc(cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)o
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== Reaction formula ==
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* inchi-key:
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* 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DMPBQ]][c] '''+''' 1 [[PROTON]][c]
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** shgdvnglfxviak-bfvorphasa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ01024]]
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** 1015.898
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-16559]]
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* Gene: [[SJ10416]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN-16558]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-16559]]
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* Gene: [[SJ15772]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(11z)-(s)-3-hydroxyhexadec-11-enoyl-coa}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: inchi-key=inchikey=shgdvnglfxviak-bfvorphasa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1015.898}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37980 37980]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=2-methyl-6-phytyl-1,4-benzoquinone methyltransferase}}
 
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{{#set: ec-number=ec-2.1.1.295}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-17814

  • common-name:
    • (11z)-(s)-3-hydroxyhexadec-11-enoyl-coa
  • smiles:
    • ccccc=ccccccccc(cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)o
  • inchi-key:
    • shgdvnglfxviak-bfvorphasa-j
  • molecular-weight:
    • 1015.898

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17814&oldid=138627"