Difference between revisions of "CPD-18490"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] == * direction: ** reversible * common-name: ** enolase * ec-num...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5289 RXN0-5289] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2PGADEHYDRAT-RXN 2PGADEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5289 RXN0-5289] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** enolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.11 ec-4.2.1.11]
+
** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-PG]][c] '''<=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GLYCERATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TARTRONATE-S-ALD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08386]]
+
* Gene: [[SJ06127]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17529]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13450]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYCOLATEMET-PWY]], glycolate and glyoxylate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATEMET-PWY GLYCOLATEMET-PWY]
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
 
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10167 10167]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18848 18848]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00658 R00658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01745 R01745]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04764 P04764]
 
−
** [http://www.uniprot.org/uniprot/P07322 P07322]
 
−
** [http://www.uniprot.org/uniprot/P07323 P07323]
 
−
** [http://www.uniprot.org/uniprot/P06733 P06733]
 
−
** [http://www.uniprot.org/uniprot/P19140 P19140]
 
−
** [http://www.uniprot.org/uniprot/P25704 P25704]
 
−
** [http://www.uniprot.org/uniprot/P30575 P30575]
 
−
** [http://www.uniprot.org/uniprot/P33675 P33675]
 
−
** [http://www.uniprot.org/uniprot/P47647 P47647]
 
−
** [http://www.uniprot.org/uniprot/Q9JU46 Q9JU46]
 
−
** [http://www.uniprot.org/uniprot/P37869 P37869]
 
−
** [http://www.uniprot.org/uniprot/Q9URB2 Q9URB2]
 
−
** [http://www.uniprot.org/uniprot/Q9CIT0 Q9CIT0]
 
−
** [http://www.uniprot.org/uniprot/Q9CHS7 Q9CHS7]
 
−
** [http://www.uniprot.org/uniprot/P43806 P43806]
 
−
** [http://www.uniprot.org/uniprot/P42448 P42448]
 
−
** [http://www.uniprot.org/uniprot/P42848 P42848]
 
−
** [http://www.uniprot.org/uniprot/Q05524 Q05524]
 
−
** [http://www.uniprot.org/uniprot/P42897 P42897]
 
−
** [http://www.uniprot.org/uniprot/P40370 P40370]
 
−
** [http://www.uniprot.org/uniprot/P51913 P51913]
 
−
** [http://www.uniprot.org/uniprot/P26300 P26300]
 
−
** [http://www.uniprot.org/uniprot/Q42887 Q42887]
 
−
** [http://www.uniprot.org/uniprot/P25696 P25696]
 
−
** [http://www.uniprot.org/uniprot/P00924 P00924]
 
−
** [http://www.uniprot.org/uniprot/P00925 P00925]
 
−
** [http://www.uniprot.org/uniprot/P0A6P9 P0A6P9]
 
−
** [http://www.uniprot.org/uniprot/P29201 P29201]
 
−
** [http://www.uniprot.org/uniprot/P09104 P09104]
 
−
** [http://www.uniprot.org/uniprot/P21550 P21550]
 
−
** [http://www.uniprot.org/uniprot/P08734 P08734]
 
−
** [http://www.uniprot.org/uniprot/Q7M4Y6 Q7M4Y6]
 
−
** [http://www.uniprot.org/uniprot/P15429 P15429]
 
−
** [http://www.uniprot.org/uniprot/P13929 P13929]
 
−
** [http://www.uniprot.org/uniprot/P15007 P15007]
 
−
** [http://www.uniprot.org/uniprot/P17182 P17182]
 
−
** [http://www.uniprot.org/uniprot/P17183 P17183]
 
−
** [http://www.uniprot.org/uniprot/P26301 P26301]
 
−
** [http://www.uniprot.org/uniprot/P31683 P31683]
 
−
** [http://www.uniprot.org/uniprot/Q54274 Q54274]
 
−
** [http://www.uniprot.org/uniprot/P42896 P42896]
 
−
** [http://www.uniprot.org/uniprot/Q27727 Q27727]
 
−
** [http://www.uniprot.org/uniprot/Q9UWJ5 Q9UWJ5]
 
−
** [http://www.uniprot.org/uniprot/P48285 P48285]
 
−
** [http://www.uniprot.org/uniprot/Q12007 Q12007]
 
−
** [http://www.uniprot.org/uniprot/P42222 P42222]
 
−
** [http://www.uniprot.org/uniprot/P75189 P75189]
 
−
** [http://www.uniprot.org/uniprot/P77972 P77972]
 
−
** [http://www.uniprot.org/uniprot/Q49059 Q49059]
 
−
** [http://www.uniprot.org/uniprot/P42895 P42895]
 
−
** [http://www.uniprot.org/uniprot/Q42971 Q42971]
 
−
** [http://www.uniprot.org/uniprot/Q43130 Q43130]
 
−
** [http://www.uniprot.org/uniprot/O69174 O69174]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=enolase}}
+
{{#set: ec-number=ec-1.1.1}}
−
{{#set: ec-number=ec-4.2.1.11}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=19}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 14:25, 26 August 2019

Reaction RXN0-5289

  • direction:
    • reversible
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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