|
|
| (9 intermediate revisions by 4 users not shown) |
| Line 1: |
Line 1: |
| − | [[Category:gene]] | + | [[Category:metabolite]] |
| − | == Gene SJ18316 == | + | == Metabolite CPD-18889 == |
| − | * transcription-direction: | + | * smiles: |
| − | ** negative | + | ** cc=c5(c(c)c9(n6([mg]27(n1(c(c(c)c(ccc(=o)occ=c(c)cccc(c)ccc=c(c)ccc=c(c)c)c=1c4([c-](c(oc)=o)c(=o)c3(=c(c)c(n2c3=4)=cc5=6)))=cc8(=c(c)c(c(c)=o)=c(n78)c=9)))))) |
| − | * right-end-position:
| + | * common-name: |
| − | ** 81825
| + | ** dihydrogeranylgeranyl bacteriochlorophyllide b |
| − | * left-end-position:
| + | * molecular-weight: |
| − | ** 66220
| + | ** 904.462 |
| − | * centisome-position:
| + | == Reaction(s) known to consume the compound == |
| − | ** 10.214344
| + | * [[RXN-17484]] |
| − | == Organism(s) associated with this gene == | + | == Reaction(s) known to produce the compound == |
| − | * [[S.japonica_carotenoid_curated]]
| + | * [[RXN-17481]] |
| − | == Reaction(s) associated == | + | == Reaction(s) of unknown directionality == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: common-name=dihydrogeranylgeranyl bacteriochlorophyllide b}} |
| − | * [[3.1.1.64-RXN]] | + | {{#set: molecular-weight=904.462}} |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | * [[ACYL-COA-HYDROLASE-RXN]] | |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | * [[CARBOXYLESTERASE-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[FACOAE18111Z]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[FACOAE182]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[PALMITOYL-COA-HYDROLASE-RXN]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RETINYL-PALMITATE-ESTERASE-RXN]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-10708]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-10711]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-10767]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-12252]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-12575]] | |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-9624]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * [[RXNQT-4366]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) associated == | |
| − | * [[PWY-5994]] | |
| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| |
| − | * [[PWY-1121]]
| |
| − | ** '''9''' reactions found over '''19''' reactions in the full pathway
| |
| − | * [[PWY-6733]]
| |
| − | ** '''8''' reactions found over '''18''' reactions in the full pathway
| |
| − | * [[PWY-321]]
| |
| − | ** '''3''' reactions found over '''16''' reactions in the full pathway
| |
| − | * [[PWY-735]]
| |
| − | ** '''16''' reactions found over '''19''' reactions in the full pathway
| |
| − | * [[PWY-6303]]
| |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-6857]]
| |
| − | ** '''3''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[PWY3O-355]]
| |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-5972]]
| |
| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
| |
| − | {{#set: transcription-direction=negative}}
| |
| − | {{#set: right-end-position=81825}}
| |
| − | {{#set: left-end-position=66220}} | |
| − | {{#set: centisome-position=10.214344 }} | |
| − | {{#set: organism associated=S.japonica_carotenoid_curated}}
| |
| − | {{#set: nb reaction associated=14}}
| |
| − | {{#set: nb pathway associated=9}}
| |
