Difference between revisions of "CPD-19148"

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(Created page with "Category:gene == Gene SJ12261 == * transcription-direction: ** negative * right-end-position: ** 174961 * left-end-position: ** 165729 * centisome-position: ** 46.01947...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ12261 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] ==
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* transcription-direction:
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* direction:
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** negative
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** left-to-right
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* right-end-position:
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* common-name:
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** 174961
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** 4-diphosphocytidyl-2-c-methylerythritol kinase
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* left-end-position:
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* ec-number:
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** 165729
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** [http://enzyme.expasy.org/EC/2.7.1.148 ec-2.7.1.148]
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* centisome-position:
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== Reaction formula ==
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** 46.01947   
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* 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ02470]]
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== Reaction(s) associated ==
 
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: transcription-direction=negative}}
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** Category: [[orthology]]
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{{#set: right-end-position=174961}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: left-end-position=165729}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: centisome-position=46.01947    }}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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== Pathway(s)  ==
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{{#set: nb reaction associated=1}}
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18438 18438]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
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{{#set: direction=left-to-right}}
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{{#set: common-name=4-diphosphocytidyl-2-c-methylerythritol kinase}}
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{{#set: ec-number=ec-2.7.1.148}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:28, 27 August 2019

Reaction 2.7.1.148-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-diphosphocytidyl-2-c-methylerythritol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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