Difference between revisions of "CPD-19162"

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(Created page with "Category:gene == Gene SJ19088 == * transcription-direction: ** positive * right-end-position: ** 206262 * left-end-position: ** 192051 * centisome-position: ** 16.834515...")
 
(Created page with "Category:gene == Gene SJ05196 == * transcription-direction: ** positive * right-end-position: ** 254087 * left-end-position: ** 235590 * centisome-position: ** 47.066322...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19088 ==
+
== Gene SJ05196 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 206262
+
** 254087
 
* left-end-position:
 
* left-end-position:
−
** 192051
+
** 235590
 
* centisome-position:
 
* centisome-position:
−
** 16.834515    
+
** 47.066322    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[APAPT]]
+
* [[RXN-9839]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5217]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SPERMIDINESYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SPERMINE-SYNTHASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY0-1303]]
+
* [[PWY-6082]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[BSUBPOLYAMSYN-PWY]]
+
* [[PWY-6073]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[POLYAMINSYN3-PWY]]
 
−
** '''4''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ARGSPECAT-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=206262}}
+
{{#set: right-end-position=254087}}
−
{{#set: left-end-position=192051}}
+
{{#set: left-end-position=235590}}
−
{{#set: centisome-position=16.834515   }}
+
{{#set: centisome-position=47.066322   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}

Revision as of 14:23, 26 August 2019

Gene SJ05196

  • transcription-direction:
    • positive
  • right-end-position:
    • 254087
  • left-end-position:
    • 235590
  • centisome-position:
    • 47.066322

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-19162&oldid=20410"