Difference between revisions of "CPD-19162"

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(Created page with "Category:gene == Gene SJ05196 == * transcription-direction: ** positive * right-end-position: ** 254087 * left-end-position: ** 235590 * centisome-position: ** 47.066322...")
(Created page with "Category:gene == Gene SJ04205 == * transcription-direction: ** negative * right-end-position: ** 42164 * left-end-position: ** 32891 * centisome-position: ** 29.948553...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05196 ==
+
== Gene SJ04205 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 254087
+
** 42164
 
* left-end-position:
 
* left-end-position:
** 235590
+
** 32891
 
* centisome-position:
 
* centisome-position:
** 47.066322    
+
** 29.948553    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-9839]]
+
* [[RXN-11634]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
* [[RXN-14177]]
* [[PWY-6082]]
+
** Category: [[orthology]]
** '''3''' reactions found over '''7''' reactions in the full pathway
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[PWY-6073]]
+
{{#set: transcription-direction=negative}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=42164}}
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=32891}}
{{#set: right-end-position=254087}}
+
{{#set: centisome-position=29.948553   }}
{{#set: left-end-position=235590}}
 
{{#set: centisome-position=47.066322   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
 

Revision as of 09:28, 27 August 2019

Gene SJ04205

  • transcription-direction:
    • negative
  • right-end-position:
    • 42164
  • left-end-position:
    • 32891
  • centisome-position:
    • 29.948553

Organism(s) associated with this gene

Reaction(s) associated