Difference between revisions of "CPD-196"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** 4-co...")
(Created page with "Category:metabolite == Metabolite CPD-196 == * common-name: ** octanoyl-coa * smiles: ** cccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] ==
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== Metabolite CPD-196 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** enoyl-coa hydratase
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** octanoyl-coa
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** 4-coumaroyl-coa hydratase
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* smiles:
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* ec-number:
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** cccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
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* inchi-key:
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== Reaction formula ==
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** kqmzyoxobsxmii-cecatxlmsa-j
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* 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12199]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 889.7
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ10275]]
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* [[3.1.2.19-RXN-CPD-196/WATER//CPD-195/CO-A/PROTON.35.]]
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** Category: [[orthology]]
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* [[ACACT4]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[ACACT4h]]
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* Gene: [[SJ03584]]
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* [[ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33.]]
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** Category: [[annotation]]
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* [[ACOA80OR]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-12669]]
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* Gene: [[SJ14591]]
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* [[RXN-14229]]
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** Category: [[annotation]]
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* [[THIOESTER-RXN[CCO-CYTOSOL]-CPD-196/WATER//CPD-195/CO-A/PROTON.48.]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ21390]]
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* [[ACACT4]]
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** Category: [[annotation]]
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* [[R223-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-13617]]
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** Category: [[orthology]]
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* [[RXN-14229]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ07211]]
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{{#set: common-name=octanoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=kqmzyoxobsxmii-cecatxlmsa-j}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: molecular-weight=889.7}}
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ03913]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[PWY-7046]], 4-coumarate degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046]
 
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** '''2''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=enoyl-coa hydratase|4-coumaroyl-coa hydratase}}
 
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{{#set: ec-number=ec-4.2.1.17}}
 
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{{#set: nb gene associated=6}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite CPD-196

  • common-name:
    • octanoyl-coa
  • smiles:
    • cccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • kqmzyoxobsxmii-cecatxlmsa-j
  • molecular-weight:
    • 889.7

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-196&oldid=139154"