Difference between revisions of "CPD-202"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** left-to-right * common-name: ** peptide deformylase *...")
(Created page with "Category:metabolite == Metabolite CPD-202 == * common-name: ** choloyl-coa * smiles: ** cc(ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
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== Metabolite CPD-202 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** peptide deformylase
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** choloyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
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** cc(ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])[ch]5(cc[ch]6([ch]7(c(o)c[ch]4(cc(o)ccc(c)4[ch](cc(o)c(c)56)7))))
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== Reaction formula ==
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* inchi-key:
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* 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
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** zkwnotqhfkyunu-jgciywtlsa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ06192]]
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** 1154.064
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[2.3.1.176-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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== Pathway(s) ==
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{{#set: common-name=choloyl-coa}}
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== Reconstruction information  ==
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{{#set: inchi-key=inchikey=zkwnotqhfkyunu-jgciywtlsa-j}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1154.064}}
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24421 24421]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=peptide deformylase}}
 
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{{#set: ec-number=ec-3.5.1.88}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite CPD-202

  • common-name:
    • choloyl-coa
  • smiles:
    • cc(ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])[ch]5(cc[ch]6([ch]7(c(o)c[ch]4(cc(o)ccc(c)4[ch](cc(o)c(c)56)7))))
  • inchi-key:
    • zkwnotqhfkyunu-jgciywtlsa-j
  • molecular-weight:
    • 1154.064

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-202&oldid=139561"