Difference between revisions of "CPD-202"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCISOM-RXN-ALPHA-GLUCOSE//CPD-15382.25. GLUCISOM-RXN-ALPHA-GLUCOSE//CPD-15382.25.] == * direction...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** left-to-right * common-name: ** peptide deformylase *...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| + | * common-name: | ||
| + | ** peptide deformylase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[SJ06192]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24421 24421] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=peptide deformylase}} | ||
| + | {{#set: ec-number=ec-3.5.1.88}} | ||
| + | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:29, 27 August 2019
Contents
Reaction 3.5.1.88-RXN
- direction:
- left-to-right
- common-name:
- peptide deformylase
- ec-number:
Reaction formula
- 1 FORMYL-L-METHIONYL-PEPTIDE[c] + 1 WATER[c] => 1 FORMATE[c] + 1 METHIONYL-PEPTIDE[c]
Gene(s) associated with this reaction
- Gene: SJ06192
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
