Difference between revisions of "CPD-2187"

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(Created page with "Category:gene == Gene SJ13034 == * transcription-direction: ** positive * right-end-position: ** 87930 * left-end-position: ** 82573 * centisome-position: ** 23.792482...")
(Created page with "Category:gene == Gene SJ17407 == * transcription-direction: ** positive * right-end-position: ** 77017 * left-end-position: ** 70439 * centisome-position: ** 26.790222...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13034 ==
+
== Gene SJ17407 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 87930
+
** 77017
 
* left-end-position:
 
* left-end-position:
−
** 82573
+
** 70439
 
* centisome-position:
 
* centisome-position:
−
** 23.792482    
+
** 26.790222    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ATPSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10717]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10841]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12484]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14023]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6307]]
+
* [[PWY-7219]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7210]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6861]]
+
* [[PWY-7198]]
−
** '''1''' reactions found over '''12''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7178]]
+
* [[PWY-7184]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=87930}}
+
{{#set: right-end-position=77017}}
−
{{#set: left-end-position=82573}}
+
{{#set: left-end-position=70439}}
−
{{#set: centisome-position=23.792482   }}
+
{{#set: centisome-position=26.790222   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=6}}
 
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Revision as of 09:28, 27 August 2019

Gene SJ17407

  • transcription-direction:
    • positive
  • right-end-position:
    • 77017
  • left-end-position:
    • 70439
  • centisome-position:
    • 26.790222

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7219
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-2187&oldid=33095"