Difference between revisions of "CPD-236"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIB5PISOM-RXN RIB5PISOM-RXN] == * direction: ** reversible * common-name: ** ribose-5-phosphate iso...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14102 RXN-14102] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIB5PISOM-RXN RIB5PISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14102 RXN-14102] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** ribose-5-phosphate isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.6 ec-5.3.1.6]
+
** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[RIBULOSE-5P]][c]
+
* 1 [[L-ARABITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-15699]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00411]]
+
* Gene: [[SJ05644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01758 R01758]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14660 14660]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25228 25228]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01056 R01056]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A7Z0 P0A7Z0]
 
−
** [http://www.uniprot.org/uniprot/Q9CDI7 Q9CDI7]
 
−
** [http://www.uniprot.org/uniprot/P44725 P44725]
 
−
** [http://www.uniprot.org/uniprot/Q58998 Q58998]
 
−
** [http://www.uniprot.org/uniprot/Q9JTM5 Q9JTM5]
 
−
** [http://www.uniprot.org/uniprot/Q9PP08 Q9PP08]
 
−
** [http://www.uniprot.org/uniprot/P37351 P37351]
 
−
** [http://www.uniprot.org/uniprot/P74234 P74234]
 
−
** [http://www.uniprot.org/uniprot/Q55766 Q55766]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=ribose-5-phosphate isomerase}}
+
{{#set: ec-number=ec-1.1.1.21}}
−
{{#set: ec-number=ec-5.3.1.6}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=6}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-14102

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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