Difference between revisions of "CPD-23713"
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(Created page with "Category:gene == Gene SJ19917 == * transcription-direction: ** positive * right-end-position: ** 444887 * left-end-position: ** 428304 * centisome-position: ** 68.63153...") |
(Created page with "Category:gene == Gene SJ13702 == * transcription-direction: ** negative * right-end-position: ** 808378 * left-end-position: ** 785664 * centisome-position: ** 59.286266...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13702 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 808378 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 785664 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 59.286266 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.145-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | * [[2.4.1.201-RXN]] |
| − | {{#set: centisome-position= | + | ** Category: [[annotation]] |
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[2.4.1.223-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-7873]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7426]] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6558]] | ||
| + | ** '''7''' reactions found over '''13''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=808378}} | ||
| + | {{#set: left-end-position=785664}} | ||
| + | {{#set: centisome-position=59.286266 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 14:24, 26 August 2019
Contents
Gene SJ13702
- transcription-direction:
- negative
- right-end-position:
- 808378
- left-end-position:
- 785664
- centisome-position:
- 59.286266
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.145-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.201-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.223-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7873
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7426
- 4 reactions found over 10 reactions in the full pathway
- PWY-6558
- 7 reactions found over 13 reactions in the full pathway
