Difference between revisions of "CPD-253"

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(Created page with "Category:gene == Gene SJ09370 == * transcription-direction: ** negative * right-end-position: ** 487330 * left-end-position: ** 478266 * centisome-position: ** 58.27843...")
 
(Created page with "Category:metabolite == Metabolite CPD-253 == * common-name: ** 4,5-seco-dopa * smiles: ** c(=o)c=c(cc([n+])c(=o)[o-])c=c(c([o-])=o)o * inchi-key: ** fnegjfdtwwxqes-qtwonpp...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ09370 ==
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== Metabolite CPD-253 ==
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* transcription-direction:
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* common-name:
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** negative
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** 4,5-seco-dopa
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* right-end-position:
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* smiles:
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** 487330
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** c(=o)c=c(cc([n+])c(=o)[o-])c=c(c([o-])=o)o
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* left-end-position:
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* inchi-key:
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** 478266
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** fnegjfdtwwxqes-qtwonppnsa-m
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* centisome-position:
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* molecular-weight:
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** 58.27843   
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** 228.181
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-8460]]
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* [[RXN-10642]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=4,5-seco-dopa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fnegjfdtwwxqes-qtwonppnsa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=228.181}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[UROGENDECARBOX-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7766]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[CHLOROPHYLL-SYN]]
 
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** '''6''' reactions found over '''9''' reactions in the full pathway
 
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* [[HEME-BIOSYNTHESIS-II]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7159]]
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY0-1415]]
 
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** '''5''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5531]]
 
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** '''4''' reactions found over '''9''' reactions in the full pathway
 
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* [[HEMESYN2-PWY]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=487330}}
 
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{{#set: left-end-position=478266}}
 
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{{#set: centisome-position=58.27843    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-253

  • common-name:
    • 4,5-seco-dopa
  • smiles:
    • c(=o)c=c(cc([n+])c(=o)[o-])c=c(c([o-])=o)o
  • inchi-key:
    • fnegjfdtwwxqes-qtwonppnsa-m
  • molecular-weight:
    • 228.181

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-253&oldid=138342"