Difference between revisions of "CPD-286"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] == * direction: ** reversible * comm...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] == * direction: ** reversible * common-name: ** 5-hydroxy-3-[(3as,4s,5r,7as)-7...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** l-glutamine:d-fructose-6-phosphate aminotransferase
+
** 5-hydroxy-3-[(3as,4s,5r,7as)-7a-methyl-1,5-dioxo-octahydro-1h-inden-4-yl]propanoyl-coa 5-dehydrogenase
 +
** 3-beta-hydroxy-delta5-steroid dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.16 ec-2.6.1.16]
+
** [http://enzyme.expasy.org/EC/1.1.1.145 ec-1.1.1.145]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[D-GLUCOSAMINE-6-P]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[CPD-13755]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-13754]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03419]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ10400]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19806]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19982]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03341]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03340]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06332]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10476]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08509]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16241]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21137]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17700]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ18633]]
+
* Gene: [[SJ21018]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04782]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21834]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01092]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04385]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02713]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
+
* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''25''' reactions in the full pathway
−
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6749]], CMP-legionaminate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6749 PWY-6749]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13237 13237]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00768 R00768]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06210 Q06210]
 
−
** [http://www.uniprot.org/uniprot/Q9RXK9 Q9RXK9]
 
−
** [http://www.uniprot.org/uniprot/P39754 P39754]
 
−
** [http://www.uniprot.org/uniprot/P0A588 P0A588]
 
−
** [http://www.uniprot.org/uniprot/O84823 O84823]
 
−
** [http://www.uniprot.org/uniprot/Q9WXZ5 Q9WXZ5]
 
−
** [http://www.uniprot.org/uniprot/Q9K1P9 Q9K1P9]
 
−
** [http://www.uniprot.org/uniprot/Q9Z6U0 Q9Z6U0]
 
−
** [http://www.uniprot.org/uniprot/Q9PLA4 Q9PLA4]
 
−
** [http://www.uniprot.org/uniprot/Q58815 Q58815]
 
−
** [http://www.uniprot.org/uniprot/Q9PMT4 Q9PMT4]
 
−
** [http://www.uniprot.org/uniprot/P44708 P44708]
 
−
** [http://www.uniprot.org/uniprot/O26060 O26060]
 
−
** [http://www.uniprot.org/uniprot/O66648 O66648]
 
−
** [http://www.uniprot.org/uniprot/O83833 O83833]
 
−
** [http://www.uniprot.org/uniprot/Q9V249 Q9V249]
 
−
** [http://www.uniprot.org/uniprot/O26273 O26273]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJ94 Q9ZJ94]
 
−
** [http://www.uniprot.org/uniprot/Q9JWN9 Q9JWN9]
 
−
** [http://www.uniprot.org/uniprot/P47856 P47856]
 
−
** [http://www.uniprot.org/uniprot/P53704 P53704]
 
−
** [http://www.uniprot.org/uniprot/Q56206 Q56206]
 
−
** [http://www.uniprot.org/uniprot/P08633 P08633]
 
−
** [http://www.uniprot.org/uniprot/P25195 P25195]
 
−
** [http://www.uniprot.org/uniprot/P40831 P40831]
 
−
** [http://www.uniprot.org/uniprot/P72720 P72720]
 
−
** [http://www.uniprot.org/uniprot/Q09740 Q09740]
 
−
** [http://www.uniprot.org/uniprot/O19908 O19908]
 
−
** [http://www.uniprot.org/uniprot/Q84421 Q84421]
 
−
** [http://www.uniprot.org/uniprot/Q19130 Q19130]
 
−
** [http://www.uniprot.org/uniprot/Q19699 Q19699]
 
−
** [http://www.uniprot.org/uniprot/O86781 O86781]
 
−
** [http://www.uniprot.org/uniprot/Q9S168 Q9S168]
 
−
** [http://www.uniprot.org/uniprot/Q56275 Q56275]
 
−
** [http://www.uniprot.org/uniprot/P14742 P14742]
 
−
** [http://www.uniprot.org/uniprot/P17169 P17169]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=l-glutamine:d-fructose-6-phosphate aminotransferase}}
+
{{#set: common-name=3-beta-hydroxy-delta5-steroid dehydrogenase|5-hydroxy-3-[(3as,4s,5r,7as)-7a-methyl-1,5-dioxo-octahydro-1h-inden-4-yl]propanoyl-coa 5-dehydrogenase}}
−
{{#set: ec-number=ec-2.6.1.16}}
+
{{#set: ec-number=ec-1.1.1.145}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=19}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction RXN-12747

  • direction:
    • reversible
  • common-name:
    • 5-hydroxy-3-[(3as,4s,5r,7as)-7a-methyl-1,5-dioxo-octahydro-1h-inden-4-yl]propanoyl-coa 5-dehydrogenase
    • 3-beta-hydroxy-delta5-steroid dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6944, androstenedione degradation: PWY-6944
    • 2 reactions found over 25 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "5-hydroxy-3-[(3as,4s,5r,7as)-7a-methyl-1,5-dioxo-octahydro-1h-inden-4-yl]propanoyl-coa 5-dehydrogenase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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