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| − | [[Category:reaction]] | + | [[Category:gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == | + | == Gene SJ22031 == |
| − | * direction:
| + | == Organism(s) associated with this gene == |
| − | ** left-to-right
| + | * [[S.japonica_carotenoid_curated]] |
| − | * common-name:
| + | == Reaction(s) associated == |
| − | ** fmn adenylyltransferase
| + | * [[4.2.2.10-RXN]] |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/2.7.7.2 ec-2.7.7.2]
| |
| − | == Reaction formula == | |
| − | * 1 [[ATP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c] | |
| − | == Gene(s) associated with this reaction == | |
| − | * Gene: [[SJ07922]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ00206]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | * Gene: [[SJ01760]] | + | * [[RXN-14897]] |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | * Gene: [[SJ01107]]
| + | == Pathway(s) associated == |
| − | ** Category: [[annotation]]
| + | * [[PWY-7243]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | ** '''1''' reactions found over '''n.a''' reactions in the full pathway |
| − | ** Category: [[orthology]]
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: nb reaction associated=2}} |
| − | == Pathway(s) == | + | {{#set: nb pathway associated=1}} |
| − | * [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
| |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| |
| − | * [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167] | |
| − | ** '''5''' reactions found over '''10''' reactions in the full pathway | |
| − | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
| |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17238 17238]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
| |
| − | ** [http://www.uniprot.org/uniprot/Q59263 Q59263]
| |
| − | {{#set: direction=left-to-right}} | |
| − | {{#set: common-name=fmn adenylyltransferase}}
| |
| − | {{#set: ec-number=ec-2.7.7.2}}
| |
| − | {{#set: nb gene associated=4}} | |
| − | {{#set: nb pathway associated=4}} | |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
| |
