Difference between revisions of "CPD-341"

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(Created page with "Category:gene == Gene SJ04586 == * transcription-direction: ** positive * right-end-position: ** 36804 * left-end-position: ** 17554 * centisome-position: ** 16.736586...")
(Created page with "Category:metabolite == Metabolite CPD-14485 == * common-name: ** glycyrrhetaldehyde * smiles: ** cc4(c)(c3(ccc2(c)(c1(c)(ccc5([ch](c1=cc(c2c(c)3ccc(o)4)=o)cc([ch]=o)(c)cc5...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ04586 ==
+
== Metabolite CPD-14485 ==
* transcription-direction:
+
* common-name:
** positive
+
** glycyrrhetaldehyde
* right-end-position:
+
* smiles:
** 36804
+
** cc4(c)(c3(ccc2(c)(c1(c)(ccc5([ch](c1=cc(c2c(c)3ccc(o)4)=o)cc([ch]=o)(c)cc5)c))))
* left-end-position:
+
* inchi-key:
** 17554
+
** otknpgbtqxvjnh-dfrazxlmsa-n
* centisome-position:
+
* molecular-weight:
** 16.736586   
+
** 454.692
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-13494]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
* [[RXN-13493]]
** Category: [[annotation]]
+
== Reaction(s) of unknown directionality ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: common-name=glycyrrhetaldehyde}}
** Category: [[orthology]]
+
{{#set: inchi-key=inchikey=otknpgbtqxvjnh-dfrazxlmsa-n}}
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: molecular-weight=454.692}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[ILEUSYN-PWY]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[ILEUDEG-PWY]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5078]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5103]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-5104]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5101]]
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5108]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[LEU-DEG2-PWY]]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5076]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7767]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[LEUSYN-PWY]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[VALDEG-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
* [[VALSYN-PWY]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[ALANINE-VALINESYN-PWY]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5057]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=36804}}
 
{{#set: left-end-position=17554}}
 
{{#set: centisome-position=16.736586    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=15}}
 

Revision as of 20:29, 18 December 2020

Metabolite CPD-14485

  • common-name:
    • glycyrrhetaldehyde
  • smiles:
    • cc4(c)(c3(ccc2(c)(c1(c)(ccc5([ch](c1=cc(c2c(c)3ccc(o)4)=o)cc([ch]=o)(c)cc5)c))))
  • inchi-key:
    • otknpgbtqxvjnh-dfrazxlmsa-n
  • molecular-weight:
    • 454.692

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality