Difference between revisions of "CPD-358"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11976 RXN-11976] == * direction: ** left-to-right * common-name: ** torulene synthase * ec-numb...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] == * direction: ** left-to-right * common-name:...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** glycerol-3-phosphate dehydrogenase |
+ | ** glycerol-3-phosphate dehydrogenase [nad+] | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.94 ec-1.1.1.94] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ00878]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16475]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-7902]], glucosylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7902 PWY-7902] |
− | ** '''3''' reactions found over ''' | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11094 11094] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00844 R00844] | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05680 R05680] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=glycerol-3-phosphate dehydrogenase [nad+]|glycerol-3-phosphate dehydrogenase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.94}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:29, 27 August 2019
Contents
Reaction GLYC3PDEHYDROGBIOSYN-RXN
- direction:
- left-to-right
- common-name:
- glycerol-3-phosphate dehydrogenase
- glycerol-3-phosphate dehydrogenase [nad+]
- ec-number:
Reaction formula
- 1 DIHYDROXY-ACETONE-PHOSPHATE[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c] => 1 GLYCEROL-3P[c] + 1 NAD-P-OR-NOP[c]
Gene(s) associated with this reaction
- Gene: SJ00878
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16475
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7902, glucosylglycerol biosynthesis: PWY-7902
- 2 reactions found over 5 reactions in the full pathway
- PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
- 3 reactions found over 5 reactions in the full pathway
- PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
- 4 reactions found over 4 reactions in the full pathway
- PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
Property "Common-name" (as page type) with input value "glycerol-3-phosphate dehydrogenase [nad+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.