Difference between revisions of "CPD-36"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] == * direction: ** left-to-right * common-name: ** thiamine phosphate...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATCDm ATCDm] == * direction: ** left-to-right * common-name: ** atp:cdp phosphotransferase, mitocho...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATCDm ATCDm] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** thiamine phosphate synthase
+
** atp:cdp phosphotransferase, mitochondria
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THZ-P]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c]
+
* 1.0 [[ATP]][m] '''+''' 1.0 [[CDP]][m] '''=>''' 1.0 [[ADP]][m] '''+''' 1.0 [[CTP]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18183]]
+
* Gene: [[SJ10125]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20500]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22329 22329]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03223 R03223]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P41835 P41835]
 
−
** [http://www.uniprot.org/uniprot/P71350 P71350]
 
−
** [http://www.uniprot.org/uniprot/O25514 O25514]
 
−
** [http://www.uniprot.org/uniprot/Q9PNL3 Q9PNL3]
 
−
** [http://www.uniprot.org/uniprot/Q9JWI2 Q9JWI2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZL01 Q9ZL01]
 
−
** [http://www.uniprot.org/uniprot/P30137 P30137]
 
−
** [http://www.uniprot.org/uniprot/P39594 P39594]
 
−
** [http://www.uniprot.org/uniprot/P40386 P40386]
 
−
** [http://www.uniprot.org/uniprot/P72965 P72965]
 
−
** [http://www.uniprot.org/uniprot/O48881 O48881]
 
−
** [http://www.uniprot.org/uniprot/O34294 O34294]
 
−
** [http://www.uniprot.org/uniprot/Q9ZBL5 Q9ZBL5]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=thiamine phosphate synthase}}
+
{{#set: common-name=atp:cdp phosphotransferase, mitochondria}}
−
{{#set: ec-number=ec-2.5.1.3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction ATCDm

  • direction:
    • left-to-right
  • common-name:
    • atp:cdp phosphotransferase, mitochondria

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-36&oldid=35276"