Difference between revisions of "CPD-3617"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-OXYGEN-MOLECULE ExchangeSeed-OXYGEN-MOLECULE] == * direction: ** reversible == Reactio...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** left-to-right * c...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-OXYGEN-MOLECULE ExchangeSeed-OXYGEN-MOLECULE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** malate dehydrogenase (nadp+)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.82 ec-1.1.1.82]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[OXYGEN-MOLECULE]][C-BOUNDARY] '''<=>''' 1.0 [[OXYGEN-MOLECULE]][e]
+
* 1 [[NADPH]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ05075]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00343 R00343]
−
{{#set: nb pathway associated=0}}
+
* UNIPROT:
−
{{#set: reconstruction category=manual}}
+
** [http://www.uniprot.org/uniprot/P15719 P15719]
−
{{#set: reconstruction tool=unknown-tool}}
+
** [http://www.uniprot.org/uniprot/P17606 P17606]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.uniprot.org/uniprot/Q43830 Q43830]
−
{{#set: reconstruction source=import_from_medium}}
+
** [http://www.uniprot.org/uniprot/P37229 P37229]
 +
** [http://www.uniprot.org/uniprot/Q05145 Q05145]
 +
** [http://www.uniprot.org/uniprot/P21528 P21528]
 +
** [http://www.uniprot.org/uniprot/P52426 P52426]
 +
** [http://www.uniprot.org/uniprot/Q08062 Q08062]
 +
** [http://www.uniprot.org/uniprot/P93104 P93104]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=malate dehydrogenase (nadp+)}}
 +
{{#set: ec-number=ec-1.1.1.82}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction MALATE-DEHYDROGENASE-NADP+-RXN

  • direction:
    • left-to-right
  • common-name:
    • malate dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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