Difference between revisions of "CPD-3617"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** left-to-right * c...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == * direction: ** left-to-right * common-na...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** malate dehydrogenase (nadp+)
+
** squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.82 ec-1.1.1.82]
+
** [http://enzyme.expasy.org/EC/1.14.14.17 ec-1.14.14.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[SQUALENE]][c] '''=>''' 1 [[EPOXYSQUALENE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05075]]
+
* Gene: [[SJ00579]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[PWY-6098]], diploterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21941 21941]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00343 R00343]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02873 R02873]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P15719 P15719]
+
** [http://www.uniprot.org/uniprot/P52020 P52020]
−
** [http://www.uniprot.org/uniprot/P17606 P17606]
+
** [http://www.uniprot.org/uniprot/P32476 P32476]
−
** [http://www.uniprot.org/uniprot/Q43830 Q43830]
+
** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
−
** [http://www.uniprot.org/uniprot/P37229 P37229]
+
** [http://www.uniprot.org/uniprot/O65829 O65829]
−
** [http://www.uniprot.org/uniprot/Q05145 Q05145]
+
** [http://www.uniprot.org/uniprot/O65726 O65726]
−
** [http://www.uniprot.org/uniprot/P21528 P21528]
+
** [http://www.uniprot.org/uniprot/O65727 O65727]
−
** [http://www.uniprot.org/uniprot/P52426 P52426]
+
** [http://www.uniprot.org/uniprot/O65402 O65402]
−
** [http://www.uniprot.org/uniprot/Q08062 Q08062]
+
** [http://www.uniprot.org/uniprot/O65403 O65403]
−
** [http://www.uniprot.org/uniprot/P93104 P93104]
+
** [http://www.uniprot.org/uniprot/O65404 O65404]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=malate dehydrogenase (nadp+)}}
+
{{#set: common-name=squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)}}
−
{{#set: ec-number=ec-1.1.1.82}}
+
{{#set: ec-number=ec-1.14.14.17}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction SQUALENE-MONOOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6098, diploterol biosynthesis: PWY-6098
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5670, epoxysqualene biosynthesis: PWY-5670
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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