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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == | + | == Metabolite tRNA-Introns == |
| − | * direction:
| |
| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** 3-methyl-2-oxobutanoate hydroxymethyltransferase | + | ** a trna intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/2.1.2.11 ec-2.1.2.11]
| + | == Reaction(s) known to produce the compound == |
| − | == Reaction formula ==
| + | * [[3.1.27.9-RXN]] |
| − | * 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction == | + | {{#set: common-name=a trna intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus}} |
| − | * Gene: [[SJ10361]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11827 11827]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
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| − | ** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
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| − | ** [http://www.uniprot.org/uniprot/P31057 P31057]
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| − | ** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
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| − | ** [http://www.uniprot.org/uniprot/P38122 P38122]
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| − | ** [http://www.uniprot.org/uniprot/Q09672 Q09672]
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| − | ** [http://www.uniprot.org/uniprot/P52997 P52997]
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| − | ** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
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| − | ** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
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| − | ** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
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| − | ** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
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| − | ** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=3-methyl-2-oxobutanoate hydroxymethyltransferase}} | |
| − | {{#set: ec-number=ec-2.1.2.11}}
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| − | {{#set: nb gene associated=1}}
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| − | {{#set: nb pathway associated=1}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
| |
