Difference between revisions of "CPD-4125"

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(Created page with "Category:gene == Gene SJ05828 == * transcription-direction: ** positive * right-end-position: ** 346790 * left-end-position: ** 327336 * centisome-position: ** 67.3384...")
(Created page with "Category:metabolite == Metabolite CPD-4125 == * common-name: ** avenasterol * smiles: ** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34)))) * inchi-k...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ05828 ==
+
== Metabolite CPD-4125 ==
* transcription-direction:
+
* common-name:
** positive
+
** avenasterol
* right-end-position:
+
* smiles:
** 346790
+
** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34))))
* left-end-position:
+
* inchi-key:
** 327336
+
** mcwvpsbqqxuctb-oqtioydcsa-n
* centisome-position:
+
* molecular-weight:
** 67.3384   
+
** 412.698
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44.]]
== Reaction(s) associated ==
+
* [[RXN-4209]]
* [[RXN-15559]]
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== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
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* [[RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44.]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
== Reaction(s) of unknown directionality ==
* [[RXN-15560]]
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{{#set: common-name=avenasterol}}
** Category: [[annotation]]
+
{{#set: inchi-key=inchikey=mcwvpsbqqxuctb-oqtioydcsa-n}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: molecular-weight=412.698}}
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7511]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=346790}}
 
{{#set: left-end-position=327336}}
 
{{#set: centisome-position=67.3384    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-4125

  • common-name:
    • avenasterol
  • smiles:
    • cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • mcwvpsbqqxuctb-oqtioydcsa-n
  • molecular-weight:
    • 412.698

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality