Difference between revisions of "CPD-4126"

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(Created page with "Category:gene == Gene SJ21862 == * transcription-direction: ** positive * right-end-position: ** 94108 * left-end-position: ** 91045 * centisome-position: ** 49.239864...")
(Created page with "Category:metabolite == Metabolite CPD-4126 == * common-name: ** 5-dehydroavenasterol * smiles: ** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34)))) *...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21862 ==
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== Metabolite CPD-4126 ==
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* transcription-direction:
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* common-name:
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** positive
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** 5-dehydroavenasterol
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* right-end-position:
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* smiles:
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** 94108
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** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
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* left-end-position:
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* inchi-key:
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** 91045
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** xprwwanupmykmf-hvegqnehsa-n
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* centisome-position:
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* molecular-weight:
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** 49.239864   
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** 410.682
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-4210]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
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* [[RXN-4209]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=5-dehydroavenasterol}}
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* [[RXN-1321]]
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{{#set: inchi-key=inchikey=xprwwanupmykmf-hvegqnehsa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=410.682}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-13395]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-8497]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-8647]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY66-375]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-5410]]
 
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** '''2''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-735]]
 
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** '''16''' reactions found over '''19''' reactions in the full pathway
 
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* [[PWY66-392]]
 
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** '''1''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-6917]]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5406]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5407]]
 
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** '''1''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5408]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=94108}}
 
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{{#set: left-end-position=91045}}
 
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{{#set: centisome-position=49.239864    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=8}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite CPD-4126

  • common-name:
    • 5-dehydroavenasterol
  • smiles:
    • cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4(c2(=cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • xprwwanupmykmf-hvegqnehsa-n
  • molecular-weight:
    • 410.682

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-4126&oldid=136816"