Difference between revisions of "CPD-4126"
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(Created page with "Category:gene == Gene SJ19366 == * transcription-direction: ** negative * right-end-position: ** 47941 * left-end-position: ** 43743 * centisome-position: ** 19.163506...") |
(Created page with "Category:gene == Gene SJ21862 == * transcription-direction: ** positive * right-end-position: ** 94108 * left-end-position: ** 91045 * centisome-position: ** 49.239864...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21862 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 94108 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 91045 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 49.239864 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ARACHIDONATE-5-LIPOXYGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN-1321]] |
| − | {{#set: right-end-position= | + | ** Category: [[orthology]] |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN-13395]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-8497]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-8647]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY66-375]] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5410]] | ||
| + | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-735]] | ||
| + | ** '''16''' reactions found over '''19''' reactions in the full pathway | ||
| + | * [[PWY66-392]] | ||
| + | ** '''1''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-6917]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5406]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5407]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5408]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=94108}} | ||
| + | {{#set: left-end-position=91045}} | ||
| + | {{#set: centisome-position=49.239864 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| + | {{#set: nb pathway associated=8}} | ||
Revision as of 14:23, 26 August 2019
Contents
Gene SJ21862
- transcription-direction:
- positive
- right-end-position:
- 94108
- left-end-position:
- 91045
- centisome-position:
- 49.239864
Organism(s) associated with this gene
Reaction(s) associated
- ARACHIDONATE-5-LIPOXYGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1321
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13395
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8497
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-8647
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-375
- 5 reactions found over 6 reactions in the full pathway
- PWY-5410
- 2 reactions found over 9 reactions in the full pathway
- PWY-735
- 16 reactions found over 19 reactions in the full pathway
- PWY66-392
- 1 reactions found over 11 reactions in the full pathway
- PWY-6917
- 2 reactions found over 3 reactions in the full pathway
- PWY-5406
- 1 reactions found over 4 reactions in the full pathway
- PWY-5407
- 1 reactions found over 5 reactions in the full pathway
- PWY-5408
- 1 reactions found over 4 reactions in the full pathway
