Difference between revisions of "CPD-4127"

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(Created page with "Category:gene == Gene SJ22175 == * transcription-direction: ** positive * right-end-position: ** 113295 * left-end-position: ** 106400 * centisome-position: ** 59.18641...")
(Created page with "Category:metabolite == Metabolite CPD-4127 == * common-name: ** isofucosterol * smiles: ** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34)))) * inchi...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ22175 ==
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== Metabolite CPD-4127 ==
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* transcription-direction:
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* common-name:
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** positive
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** isofucosterol
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* right-end-position:
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* smiles:
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** 113295
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** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
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* left-end-position:
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* inchi-key:
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** 106400
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** oselkochbmdkej-wgmizeqosa-n
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* centisome-position:
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* molecular-weight:
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** 59.18641   
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** 412.698
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-4210]]
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* [[CARBODEHYDRAT-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=isofucosterol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=oselkochbmdkej-wgmizeqosa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=412.698}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN0-5224]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-6142]]
 
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** '''10''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-7115]]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWYQT-4429]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[CYANCAT-PWY]]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5744]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5789]]
 
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** '''8''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-7117]]
 
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** '''10''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-5743]]
 
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** '''5''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-241]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=113295}}
 
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{{#set: left-end-position=106400}}
 
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{{#set: centisome-position=59.18641    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=9}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-4127

  • common-name:
    • isofucosterol
  • smiles:
    • cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • oselkochbmdkej-wgmizeqosa-n
  • molecular-weight:
    • 412.698

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-4127&oldid=138406"