Difference between revisions of "CPD-4127"

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(Created page with "Category:gene == Gene SJ02471 == * transcription-direction: ** positive * right-end-position: ** 108786 * left-end-position: ** 102291 * centisome-position: ** 75.81772...")
(Created page with "Category:metabolite == Metabolite CPD-4127 == * common-name: ** isofucosterol * smiles: ** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34)))) * inchi...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02471 ==
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== Metabolite CPD-4127 ==
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* transcription-direction:
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* common-name:
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** positive
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** isofucosterol
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* right-end-position:
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* smiles:
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** 108786
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** cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
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* left-end-position:
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* inchi-key:
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** 102291
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** oselkochbmdkej-wgmizeqosa-n
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* centisome-position:
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* molecular-weight:
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** 75.81772   
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** 412.698
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-4210]]
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* [[NADH-DEHYDROG-A-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=isofucosterol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=oselkochbmdkej-wgmizeqosa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=412.698}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[NADH-DEHYDROGENASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[R00281]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN0-5330]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY0-1335]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-4302]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3781]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1334]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6692]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-5083]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7279]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1573]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7269]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1568]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1567]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=108786}}
 
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{{#set: left-end-position=102291}}
 
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{{#set: centisome-position=75.81772    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=11}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-4127

  • common-name:
    • isofucosterol
  • smiles:
    • cc=c(c(c)c)ccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • oselkochbmdkej-wgmizeqosa-n
  • molecular-weight:
    • 412.698

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-4127&oldid=138406"