|
|
| Line 1: |
Line 1: |
| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-N-METHYLTRANSFERASE-RXN GLYCINE-N-METHYLTRANSFERASE-RXN] == | + | == Metabolite CPD-2742 == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** dimethylglycine n-methyltransferase | + | ** cotinine |
| − | * ec-number: | + | * smiles: |
| − | ** [http://enzyme.expasy.org/EC/2.1.1.20 ec-2.1.1.20] | + | ** c1(=o)(cc[ch](n(c)1)c2(c=nc=cc=2)) |
| − | * synonymous:
| + | * inchi-key: |
| − | ** gsdmt
| + | ** uikrocxwunqspj-vifpvbqesa-n |
| − | ** gmt
| + | * molecular-weight: |
| − | ** apgsmt
| + | ** 176.218 |
| − | ** gsmt
| + | == Reaction(s) known to consume the compound == |
| − | ** s-adenosyl-l-methionine:sarcosine n-methyltransferase
| + | * [[RXN66-161]] |
| − | ** glycine sarcosine dimethylglycine n-methyltransferase
| + | * [[RXN66-163]] |
| − | ** glycine sarcosine n-methyltransferase
| + | * [[RXN66-168]] |
| − | == Reaction formula ==
| + | * [[RXN66-169]] |
| − | * 1 [[GLY]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SARCOSINE]][c]
| + | == Reaction(s) known to produce the compound == |
| − | == Gene(s) associated with this reaction == | + | == Reaction(s) of unknown directionality == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: common-name=cotinine}} |
| − | * Gene: [[SJ12116]] | + | {{#set: inchi-key=inchikey=uikrocxwunqspj-vifpvbqesa-n}} |
| − | ** Category: [[annotation]]
| + | {{#set: molecular-weight=176.218}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ12128]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ12118]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ12119]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ18177]] | |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ03081]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ02539]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ10116]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ02540]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ14716]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ11087]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | * [[PWY-6004]], glycine betaine biosynthesis V (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004]
| |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19938 19938]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00367 R00367]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P13255 P13255]
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=dimethylglycine n-methyltransferase}} | |
| − | {{#set: ec-number=ec-2.1.1.20}} | |
| − | {{#set: synonymous=glycine sarcosine dimethylglycine n-methyltransferase|s-adenosyl-l-methionine:sarcosine n-methyltransferase|gsdmt|glycine sarcosine n-methyltransferase|gmt|apgsmt|gsmt}}
| |
| − | {{#set: nb gene associated=11}} | |
| − | {{#set: nb pathway associated=2}}
| |
| − | {{#set: reconstruction category=annotation}}
| |
| − | {{#set: reconstruction tool=pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=saccharina_japonica_genome}}
| |
