Difference between revisions of "CPD-4581"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLGLUTKIN-RXN ACETYLGLUTKIN-RXN] == * direction: ** reversible * common-name: ** acetylglutamat...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] == * direction: ** reversible * co...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLGLUTKIN-RXN ACETYLGLUTKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** acetylglutamate kinase
+
** l-tryptophan:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.8 ec-2.7.2.8]
+
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-GLU]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[N-ACETYL-GLUTAMYL-P]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09366]]
+
* Gene: [[SJ04188]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
+
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5081 PWY-5081]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate): [http://metacyc.org/META/NEW-IMAGE?object=TRPKYNCAT-PWY TRPKYNCAT-PWY]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
+
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=TRPIAACAT-PWY TRPIAACAT-PWY]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14632 14632]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02649 R02649]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P54898 P54898]
 
−
** [http://www.uniprot.org/uniprot/Q9PIR8 Q9PIR8]
 
−
** [http://www.uniprot.org/uniprot/Q60382 Q60382]
 
−
** [http://www.uniprot.org/uniprot/Q9JUK2 Q9JUK2]
 
−
** [http://www.uniprot.org/uniprot/Q9CHD2 Q9CHD2]
 
−
** [http://www.uniprot.org/uniprot/Q07905 Q07905]
 
−
** [http://www.uniprot.org/uniprot/P0A6C8 P0A6C8]
 
−
** [http://www.uniprot.org/uniprot/Q01217 Q01217]
 
−
** [http://www.uniprot.org/uniprot/P31318 P31318]
 
−
** [http://www.uniprot.org/uniprot/P69366 P69366]
 
−
** [http://www.uniprot.org/uniprot/P69365 P69365]
 
−
** [http://www.uniprot.org/uniprot/P73326 P73326]
 
−
** [http://www.uniprot.org/uniprot/O50147 O50147]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=acetylglutamate kinase}}
+
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
−
{{#set: ec-number=ec-2.7.2.8}}
+
{{#set: ec-number=ec-2.6.1.27}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:28, 27 August 2019

Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • l-tryptophan:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5081, L-tryptophan degradation VIII (to tryptophol): PWY-5081
    • 1 reactions found over 4 reactions in the full pathway
  • TRPKYNCAT-PWY, L-tryptophan degradation IV (via indole-3-lactate): TRPKYNCAT-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • TRPIAACAT-PWY, indole-3-acetate biosynthesis VI (bacteria): TRPIAACAT-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 5 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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