Difference between revisions of "CPD-4618"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ01083 == * transcription-direction: ** negative * right-end-position: ** 43687 * left-end-position: ** 29076 * centisome-position: ** 18.686615...")
(Created page with "Category:metabolite == Metabolite 3-DEHYDRO-SHIKIMATE == * common-name: ** 3-dehydroshikimate * smiles: ** c([o-])(=o)c1(=cc(=o)c(o)c(o)c1) * inchi-key: ** slwwjzmphjjoph-...")
Line 1: Line 1:
−
[[Category:gene]]
+
[[Category:metabolite]]
−
== Gene SJ01083 ==
+
== Metabolite 3-DEHYDRO-SHIKIMATE ==
−
* transcription-direction:
+
* common-name:
−
** negative
+
** 3-dehydroshikimate
−
* right-end-position:
+
* smiles:
−
** 43687
+
** c([o-])(=o)c1(=cc(=o)c(o)c(o)c1)
−
* left-end-position:
+
* inchi-key:
−
** 29076
+
** slwwjzmphjjoph-phdidxhhsa-m
−
* centisome-position:
+
* molecular-weight:
−
** 18.686615   
+
** 171.129
−
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
−
== Reaction(s) associated ==
+
* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
−
* [[ANTHRANSYN-RXN]]
+
== Reaction(s) known to produce the compound ==
−
** Category: [[annotation]]
+
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-7968]]
−
* [[IGPSYN-RXN]]
+
== Reaction(s) of unknown directionality ==
−
** Category: [[annotation]]
+
{{#set: common-name=3-dehydroshikimate}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=slwwjzmphjjoph-phdidxhhsa-m}}
−
** Category: [[orthology]]
+
{{#set: molecular-weight=171.129}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PRAISOM-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-5958]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TRPSYN-PWY]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6661]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6660]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=43687}}
 
−
{{#set: left-end-position=29076}}
 
−
{{#set: centisome-position=18.686615    }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=3}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 20:34, 18 December 2020

Metabolite 3-DEHYDRO-SHIKIMATE

  • common-name:
    • 3-dehydroshikimate
  • smiles:
    • c([o-])(=o)c1(=cc(=o)c(o)c(o)c1)
  • inchi-key:
    • slwwjzmphjjoph-phdidxhhsa-m
  • molecular-weight:
    • 171.129

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-4618&oldid=47113"