Difference between revisions of "CPD-4821"

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(Created page with "Category:gene == Gene SJ22333 == * transcription-direction: ** negative * right-end-position: ** 92897 * left-end-position: ** 80732 * centisome-position: ** 45.36041...")
 
(Created page with "Category:metabolite == Metabolite CPD-4821 == * common-name: ** kanamycin a * smiles: ** c([n+])c1(c(o)c(o)c(o)c(o1)oc2(c([n+])cc(c(c2o)oc3(oc(co)c(o)c([n+])c(o)3))[n+]))...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ22333 ==
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== Metabolite CPD-4821 ==
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* transcription-direction:
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* common-name:
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** negative
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** kanamycin a
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* right-end-position:
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* smiles:
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** 92897
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** c([n+])c1(c(o)c(o)c(o)c(o1)oc2(c([n+])cc(c(c2o)oc3(oc(co)c(o)c([n+])c(o)3))[n+]))
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* left-end-position:
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* inchi-key:
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** 80732
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** sbujhosqtjfqjx-noamyhissa-r
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* centisome-position:
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* molecular-weight:
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** 45.36041   
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** 488.534
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13167]]
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== Reaction(s) associated ==
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* [[RXN-15285]]
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* [[NADH-DEHYDROG-A-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=kanamycin a}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=sbujhosqtjfqjx-noamyhissa-r}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=488.534}}
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* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[NADH-DEHYDROGENASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5330]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY0-1335]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-4302]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3781]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1334]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6692]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-5083]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7279]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1573]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7269]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1568]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1567]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=92897}}
 
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{{#set: left-end-position=80732}}
 
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{{#set: centisome-position=45.36041    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=11}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-4821

  • common-name:
    • kanamycin a
  • smiles:
    • c([n+])c1(c(o)c(o)c(o)c(o1)oc2(c([n+])cc(c(c2o)oc3(oc(co)c(o)c([n+])c(o)3))[n+]))
  • inchi-key:
    • sbujhosqtjfqjx-noamyhissa-r
  • molecular-weight:
    • 488.534

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-4821&oldid=138249"