Difference between revisions of "CPD-488"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-nucleoti...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** left-to-right * common-name: ** phosphoribosy...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3',5'-cyclic-nucleotide phosphodiesterase
+
** phosphoribosyl-amp cyclohydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.17 ec-3.1.4.17]
+
** [http://enzyme.expasy.org/EC/3.5.4.19 ec-3.5.4.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07444]]
−
* Gene: [[SJ04705]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18680]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14703]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03999]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18679]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09726]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14526]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10845]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14654 14654]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20050 20050]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P12019 P12019]
+
** [http://www.uniprot.org/uniprot/P44434 P44434]
−
** [http://www.uniprot.org/uniprot/Q56686 Q56686]
+
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
−
** [http://www.uniprot.org/uniprot/P14099 P14099]
+
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
−
** [http://www.uniprot.org/uniprot/Q01066 Q01066]
+
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
−
** [http://www.uniprot.org/uniprot/Q01061 Q01061]
+
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
−
** [http://www.uniprot.org/uniprot/P14100 P14100]
+
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
−
** [http://www.uniprot.org/uniprot/Q01065 Q01065]
+
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
−
** [http://www.uniprot.org/uniprot/P27815 P27815]
+
** [http://www.uniprot.org/uniprot/O28329 O28329]
−
** [http://www.uniprot.org/uniprot/O66909 O66909]
+
** [http://www.uniprot.org/uniprot/O34912 O34912]
−
** [http://www.uniprot.org/uniprot/P14270 P14270]
+
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
−
** [http://www.uniprot.org/uniprot/O27755 O27755]
+
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
−
** [http://www.uniprot.org/uniprot/P44685 P44685]
+
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
−
** [http://www.uniprot.org/uniprot/P22434 P22434]
+
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
−
** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
+
** [http://www.uniprot.org/uniprot/O67780 O67780]
−
** [http://www.uniprot.org/uniprot/O26280 O26280]
+
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
−
** [http://www.uniprot.org/uniprot/O06629 O06629]
+
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
−
** [http://www.uniprot.org/uniprot/O30241 O30241]
+
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
−
** [http://www.uniprot.org/uniprot/P14644 P14644]
+
** [http://www.uniprot.org/uniprot/P45353 P45353]
−
** [http://www.uniprot.org/uniprot/P54748 P54748]
+
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
−
** [http://www.uniprot.org/uniprot/Q13945 Q13945]
+
** [http://www.uniprot.org/uniprot/P00815 P00815]
−
** [http://www.uniprot.org/uniprot/Q01062 Q01062]
+
** [http://www.uniprot.org/uniprot/P07685 P07685]
−
** [http://www.uniprot.org/uniprot/P54827 P54827]
+
** [http://www.uniprot.org/uniprot/O59667 O59667]
−
** [http://www.uniprot.org/uniprot/Q01064 Q01064]
+
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
−
** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
+
** [http://www.uniprot.org/uniprot/O82768 O82768]
−
** [http://www.uniprot.org/uniprot/O60658 O60658]
+
** [http://www.uniprot.org/uniprot/P10367 P10367]
−
** [http://www.uniprot.org/uniprot/P36599 P36599]
+
** [http://www.uniprot.org/uniprot/P06989 P06989]
−
** [http://www.uniprot.org/uniprot/P30645 P30645]
 
−
** [http://www.uniprot.org/uniprot/Q45859 Q45859]
 
−
** [http://www.uniprot.org/uniprot/P12252 P12252]
 
−
** [http://www.uniprot.org/uniprot/P06776 P06776]
 
−
** [http://www.uniprot.org/uniprot/Q08493 Q08493]
 
−
** [http://www.uniprot.org/uniprot/Q63421 Q63421]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3',5'-cyclic-nucleotide phosphodiesterase}}
+
{{#set: common-name=phosphoribosyl-amp cyclohydrolase}}
−
{{#set: ec-number=ec-3.1.4.17}}
+
{{#set: ec-number=ec-3.5.4.19}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction HISTCYCLOHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosyl-amp cyclohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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