Difference between revisions of "CPD-558"

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(Created page with "Category:gene == Gene SJ13300 == * transcription-direction: ** negative * right-end-position: ** 180413 * left-end-position: ** 155939 * centisome-position: ** 45.459686...")
(Created page with "Category:metabolite == Metabolite CPD-558 == * common-name: ** pimeloyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(cccccc([o-])=o)=o)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ13300 ==
+
== Metabolite CPD-558 ==
* transcription-direction:
+
* common-name:
** negative
+
** pimeloyl-coa
* right-end-position:
+
* smiles:
** 180413
+
** cc(c)(c(o)c(=o)nccc(=o)nccsc(cccccc([o-])=o)=o)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
* left-end-position:
+
* inchi-key:
** 155939
+
** lycrxmtyuzduga-uyrkptjqsa-i
* centisome-position:
+
* molecular-weight:
** 45.459686   
+
** 904.649
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[7KAPSYN-RXN]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=pimeloyl-coa}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=lycrxmtyuzduga-uyrkptjqsa-i}}
** Category: [[orthology]]
+
{{#set: molecular-weight=904.649}}
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY3DJ-12]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[SPHINGOLIPID-SYN-PWY]]
 
** '''4''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-5129]]
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=180413}}
 
{{#set: left-end-position=155939}}
 
{{#set: centisome-position=45.459686    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-558

  • common-name:
    • pimeloyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(cccccc([o-])=o)=o)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • lycrxmtyuzduga-uyrkptjqsa-i
  • molecular-weight:
    • 904.649

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality