Difference between revisions of "CPD-641"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYDRHAMEPIM-RXN DTDPDEHYDRHAMEPIM-RXN] == * direction: ** left-to-right * common-name: ** dtd...")
(Created page with "Category:metabolite == Metabolite CPD-641 == * common-name: ** (r)-mevalonate diphosphate * smiles: ** cc(o)(ccop(=o)([o-])op([o-])([o-])=o)cc(=o)[o-] * inchi-key: ** sigq...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYDRHAMEPIM-RXN DTDPDEHYDRHAMEPIM-RXN] ==
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== Metabolite CPD-641 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** dtdp-4-dehydrorhamnose 3,5-epimerase
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** (r)-mevalonate diphosphate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13]
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** cc(o)(ccop(=o)([o-])op([o-])([o-])=o)cc(=o)[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c]
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** sigqqubjqxsamw-zcfiwibfsa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ22556]]
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** 304.087
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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== Pathway(s) ==
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* [[PHOSPHOMEVALONATE-KINASE-RXN]]
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* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
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== Reaction(s) known to produce the compound ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PHOSPHOMEVALONATE-KINASE-RXN]]
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* [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
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== Reaction(s) of unknown directionality ==
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** '''2''' reactions found over '''5''' reactions in the full pathway
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{{#set: common-name=(r)-mevalonate diphosphate}}
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* [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814]
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{{#set: inchi-key=inchikey=sigqqubjqxsamw-zcfiwibfsa-j}}
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** '''2''' reactions found over '''6''' reactions in the full pathway
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{{#set: molecular-weight=304.087}}
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1]
 
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** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7]
 
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** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9]
 
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** [http://www.uniprot.org/uniprot/P37745 P37745]
 
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** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5]
 
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** [http://www.uniprot.org/uniprot/P37763 P37763]
 
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** [http://www.uniprot.org/uniprot/Q46770 Q46770]
 
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** [http://www.uniprot.org/uniprot/P29783 P29783]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}}
 
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{{#set: ec-number=ec-5.1.3.13}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-641

  • common-name:
    • (r)-mevalonate diphosphate
  • smiles:
    • cc(o)(ccop(=o)([o-])op([o-])([o-])=o)cc(=o)[o-]
  • inchi-key:
    • sigqqubjqxsamw-zcfiwibfsa-j
  • molecular-weight:
    • 304.087

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-641&oldid=138613"