Difference between revisions of "CPD-6661"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ08599 == * transcription-direction: ** positive * right-end-position: ** 647130 * left-end-position: ** 636108 * centisome-position: ** 74.06733...")
(Created page with "Category:gene == Gene SJ01931 == * transcription-direction: ** negative * right-end-position: ** 109831 * left-end-position: ** 104908 * centisome-position: ** 72.97339...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08599 ==
+
== Gene SJ01931 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 647130
+
** 109831
 
* left-end-position:
 
* left-end-position:
−
** 636108
+
** 104908
 
* centisome-position:
 
* centisome-position:
−
** 74.06733    
+
** 72.97339    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ACETYLORNDEACET-RXN]]
−
* [[GAMMA-GLUTAMYLTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-7933]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12618]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-18092]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-6601]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9157]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-336]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7559]]
+
* [[GLUTORN-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-4041]]
+
* [[PWY-5154]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5826]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
{{#set: right-end-position=109831}}
−
* [[PWY66-375]]
+
{{#set: left-end-position=104908}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=72.97339   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=647130}}
 
−
{{#set: left-end-position=636108}}
 
−
{{#set: centisome-position=74.06733   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}

Revision as of 09:28, 27 August 2019

Gene SJ01931

  • transcription-direction:
    • negative
  • right-end-position:
    • 109831
  • left-end-position:
    • 104908
  • centisome-position:
    • 72.97339

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-6661&oldid=33485"