Difference between revisions of "CPD-698"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** reversible * co...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTREDUCTOISOM-RXN ACETOOHBUTREDUCTOISOM-RXN] == * direction: ** left-to-right * common-name...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTREDUCTOISOM-RXN ACETOOHBUTREDUCTOISOM-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** cystathionine β-synthase
+
** 2-aceto-2-hydroxy-butyrate:nadph+ oxidoreductase (isomerizing)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.22 ec-4.2.1.22]
+
** [http://enzyme.expasy.org/EC/1.1.1.86 ec-1.1.1.86]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HOMO-CYS]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[1-KETO-2-METHYLVALERATE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15937]]
+
* Gene: [[SJ10245]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20026]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15938]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
+
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-801]], homocysteine and cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10115 10115]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13493 13493]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32232 P32232]
+
** [http://www.uniprot.org/uniprot/P06168 P06168]
−
** [http://www.uniprot.org/uniprot/P32582 P32582]
+
** [http://www.uniprot.org/uniprot/P44822 P44822]
−
** [http://www.uniprot.org/uniprot/P35520 P35520]
+
** [http://www.uniprot.org/uniprot/O25097 O25097]
−
** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
+
** [http://www.uniprot.org/uniprot/Q02138 Q02138]
−
** [http://www.uniprot.org/uniprot/Q12633 Q12633]
+
** [http://www.uniprot.org/uniprot/Q57179 Q57179]
−
** [http://www.uniprot.org/uniprot/P72662 P72662]
+
** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3]
−
** [http://www.uniprot.org/uniprot/O59701 O59701]
+
** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P05793 P05793]
−
{{#set: common-name=cystathionine &beta;-synthase}}
+
** [http://www.uniprot.org/uniprot/P38674 P38674]
−
{{#set: ec-number=ec-4.2.1.22}}
+
** [http://www.uniprot.org/uniprot/Q59500 Q59500]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/Q01292 Q01292]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/Q05758 Q05758]
−
{{#set: reconstruction category=orthology|annotation}}
+
** [http://www.uniprot.org/uniprot/O82043 O82043]
 +
** [http://www.uniprot.org/uniprot/P78827 P78827]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=2-aceto-2-hydroxy-butyrate:nadph+ oxidoreductase (isomerizing)}}
 +
{{#set: ec-number=ec-1.1.1.86}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction ACETOOHBUTREDUCTOISOM-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-aceto-2-hydroxy-butyrate:nadph+ oxidoreductase (isomerizing)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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