Difference between revisions of "CPD-7002"

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(Created page with "Category:gene == Gene SJ21981 == * transcription-direction: ** positive * right-end-position: ** 473667 * left-end-position: ** 469992 * centisome-position: ** 80.05833...")
(Created page with "Category:metabolite == Metabolite CPD-7002 == * common-name: ** dihydrogeranylgeranyl diphosphate * smiles: ** cc(=cccc(=cccc(cccc(=ccop([o-])(=o)op([o-])(=o)[o-])c)c)c)c...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21981 ==
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== Metabolite CPD-7002 ==
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* transcription-direction:
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* common-name:
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** positive
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** dihydrogeranylgeranyl diphosphate
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* right-end-position:
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* smiles:
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** 473667
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** cc(=cccc(=cccc(cccc(=ccop([o-])(=o)op([o-])(=o)[o-])c)c)c)c
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* left-end-position:
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* inchi-key:
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** 469992
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** yjganofpasczbk-wcnzlwbosa-k
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* centisome-position:
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* molecular-weight:
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** 80.05833   
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** 449.44
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-7658]]
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== Reaction(s) associated ==
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* [[RXN-7659]]
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* [[ACETYLORNDEACET-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[RXN-7658]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-7659]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[AMINOACYLASE-RXN]]
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{{#set: common-name=dihydrogeranylgeranyl diphosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=yjganofpasczbk-wcnzlwbosa-k}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=449.44}}
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* [[RXN-13684]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[GLUTORN-PWY]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=473667}}
 
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{{#set: left-end-position=469992}}
 
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{{#set: centisome-position=80.05833    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=1}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite CPD-7002

  • common-name:
    • dihydrogeranylgeranyl diphosphate
  • smiles:
    • cc(=cccc(=cccc(cccc(=ccop([o-])(=o)op([o-])(=o)[o-])c)c)c)c
  • inchi-key:
    • yjganofpasczbk-wcnzlwbosa-k
  • molecular-weight:
    • 449.44

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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