Difference between revisions of "CPD-7005"

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(Created page with "Category:gene == Gene SJ19531 == * transcription-direction: ** positive * right-end-position: ** 65812 * left-end-position: ** 62478 * centisome-position: ** 27.697464...")
(Created page with "Category:metabolite == Metabolite CPD-7005 == * common-name: ** geranylgeranyl chlorophyll a * smiles: ** c=cc2(=c(c)c5(=cc1(c(c)c(ccc(=o)occ=c(c)ccc=c(c)ccc=c(c)ccc=c(c)c...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ19531 ==
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== Metabolite CPD-7005 ==
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* transcription-direction:
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* common-name:
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** positive
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** geranylgeranyl chlorophyll a
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* right-end-position:
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* smiles:
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** 65812
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** c=cc2(=c(c)c5(=cc1(c(c)c(ccc(=o)occ=c(c)ccc=c(c)ccc=c(c)ccc=c(c)c)c(n=1)=c7([c-](c(oc)=o)c(=o)c6(c(c)=c4(n([mg]n(c2=cc3(c(c)=c(cc)c(n=3)=c4))5)c=67))))))
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* left-end-position:
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* inchi-key:
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** 62478
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** qblsepresqjtci-znlwzyposa-m
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* centisome-position:
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* molecular-weight:
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** 27.697464   
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** 886.447
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-17428]]
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== Reaction(s) associated ==
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* [[RXN-7664]]
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* [[ATPASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN-7663]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: common-name=geranylgeranyl chlorophyll a}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=qblsepresqjtci-znlwzyposa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=886.447}}
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=65812}}
 
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{{#set: left-end-position=62478}}
 
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{{#set: centisome-position=27.697464    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite CPD-7005

  • common-name:
    • geranylgeranyl chlorophyll a
  • smiles:
    • c=cc2(=c(c)c5(=cc1(c(c)c(ccc(=o)occ=c(c)ccc=c(c)ccc=c(c)ccc=c(c)c)c(n=1)=c7([c-](c(oc)=o)c(=o)c6(c(c)=c4(n([mg]n(c2=cc3(c(c)=c(cc)c(n=3)=c4))5)c=67))))))
  • inchi-key:
    • qblsepresqjtci-znlwzyposa-m
  • molecular-weight:
    • 886.447

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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