Difference between revisions of "CPD-7032"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPAMINOTRANS-RXN ASPAMINOTRANS-RXN] == * direction: ** reversible * common-name: ** aspartate tran...")
(Created page with "Category:metabolite == Metabolite CPD-7032 == * common-name: ** 3-methylbutanol * smiles: ** cc(cco)c * inchi-key: ** phtqwckdnzkarw-uhfffaoysa-n * molecular-weight: ** 88...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPAMINOTRANS-RXN ASPAMINOTRANS-RXN] ==
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== Metabolite CPD-7032 ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** aspartate transaminase
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** 3-methylbutanol
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** l-phenylalanine:2-oxoglutarate aminotransferase
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* smiles:
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* ec-number:
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** cc(cco)c
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** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
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* inchi-key:
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== Reaction formula ==
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** phtqwckdnzkarw-uhfffaoysa-n
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 88.149
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ04188]]
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* [[RXN-7693]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-7693]]
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* Gene: [[SJ08678]]
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=3-methylbutanol}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: inchi-key=inchikey=phtqwckdnzkarw-uhfffaoysa-n}}
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* Gene: [[SJ05778]]
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{{#set: molecular-weight=88.149}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ07646]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ20943]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[ASPARTATESYN-PWY]], L-aspartate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[GLUTDEG-PWY]], L-glutamate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
 
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** '''4''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
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** '''10''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-DEG1-PWY ASPARTATE-DEG1-PWY]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]], L-aspartate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=MALATE-ASPARTATE-SHUTTLE-PWY MALATE-ASPARTATE-SHUTTLE-PWY]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21827 21827]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q7LZ21 Q7LZ21]
 
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** [http://www.uniprot.org/uniprot/P08906 P08906]
 
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** [http://www.uniprot.org/uniprot/P12343 P12343]
 
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** [http://www.uniprot.org/uniprot/Q06191 Q06191]
 
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** [http://www.uniprot.org/uniprot/Q02635 Q02635]
 
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** [http://www.uniprot.org/uniprot/Q60317 Q60317]
 
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** [http://www.uniprot.org/uniprot/O28151 O28151]
 
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** [http://www.uniprot.org/uniprot/O67781 O67781]
 
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** [http://www.uniprot.org/uniprot/P08907 P08907]
 
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** [http://www.uniprot.org/uniprot/P12345 P12345]
 
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** [http://www.uniprot.org/uniprot/Q9X0Y2 Q9X0Y2]
 
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** [http://www.uniprot.org/uniprot/Q9PPF7 Q9PPF7]
 
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** [http://www.uniprot.org/uniprot/Q9JVS3 Q9JVS3]
 
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** [http://www.uniprot.org/uniprot/P53001 P53001]
 
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** [http://www.uniprot.org/uniprot/P96847 P96847]
 
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** [http://www.uniprot.org/uniprot/Q9K0P5 Q9K0P5]
 
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** [http://www.uniprot.org/uniprot/Q9X224 Q9X224]
 
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** [http://www.uniprot.org/uniprot/Q9Y9P0 Q9Y9P0]
 
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** [http://www.uniprot.org/uniprot/Q9RWP3 Q9RWP3]
 
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** [http://www.uniprot.org/uniprot/O66737 O66737]
 
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** [http://www.uniprot.org/uniprot/O28650 O28650]
 
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** [http://www.uniprot.org/uniprot/O30304 O30304]
 
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** [http://www.uniprot.org/uniprot/Q9CEK7 Q9CEK7]
 
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** [http://www.uniprot.org/uniprot/O27916 O27916]
 
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** [http://www.uniprot.org/uniprot/O05237 O05237]
 
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** [http://www.uniprot.org/uniprot/Q9YE99 Q9YE99]
 
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** [http://www.uniprot.org/uniprot/O25383 O25383]
 
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** [http://www.uniprot.org/uniprot/O27638 O27638]
 
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** [http://www.uniprot.org/uniprot/O96142 O96142]
 
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** [http://www.uniprot.org/uniprot/Q9ZLG5 Q9ZLG5]
 
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** [http://www.uniprot.org/uniprot/P00507 P00507]
 
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** [http://www.uniprot.org/uniprot/P44425 P44425]
 
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** [http://www.uniprot.org/uniprot/Q59569 Q59569]
 
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** [http://www.uniprot.org/uniprot/Q59197 Q59197]
 
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** [http://www.uniprot.org/uniprot/P37833 P37833]
 
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** [http://www.uniprot.org/uniprot/O48599 O48599]
 
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** [http://www.uniprot.org/uniprot/O33822 O33822]
 
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** [http://www.uniprot.org/uniprot/P05201 P05201]
 
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** [http://www.uniprot.org/uniprot/P05202 P05202]
 
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** [http://www.uniprot.org/uniprot/P14909 P14909]
 
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** [http://www.uniprot.org/uniprot/P17174 P17174]
 
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** [http://www.uniprot.org/uniprot/P33097 P33097]
 
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** [http://www.uniprot.org/uniprot/Q43057 Q43057]
 
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** [http://www.uniprot.org/uniprot/Q43305 Q43305]
 
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** [http://www.uniprot.org/uniprot/Q42794 Q42794]
 
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** [http://www.uniprot.org/uniprot/P12344 P12344]
 
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** [http://www.uniprot.org/uniprot/Q01802 Q01802]
 
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** [http://www.uniprot.org/uniprot/Q40325 Q40325]
 
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** [http://www.uniprot.org/uniprot/P36692 P36692]
 
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** [http://www.uniprot.org/uniprot/P28011 P28011]
 
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** [http://www.uniprot.org/uniprot/Q42391 Q42391]
 
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** [http://www.uniprot.org/uniprot/Q9L0L5 Q9L0L5]
 
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** [http://www.uniprot.org/uniprot/Q53951 Q53951]
 
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** [http://www.uniprot.org/uniprot/Q42803 Q42803]
 
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** [http://www.uniprot.org/uniprot/Q42425 Q42425]
 
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** [http://www.uniprot.org/uniprot/Q55128 Q55128]
 
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** [http://www.uniprot.org/uniprot/P72859 P72859]
 
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** [http://www.uniprot.org/uniprot/Q55453 Q55453]
 
−
** [http://www.uniprot.org/uniprot/Q55679 Q55679]
 
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** [http://www.uniprot.org/uniprot/O48598 O48598]
 
−
** [http://www.uniprot.org/uniprot/Q42991 Q42991]
 
−
** [http://www.uniprot.org/uniprot/P46248 P46248]
 
−
** [http://www.uniprot.org/uniprot/O48548 O48548]
 
−
** [http://www.uniprot.org/uniprot/Q60013 Q60013]
 
−
** [http://www.uniprot.org/uniprot/P28734 P28734]
 
−
** [http://www.uniprot.org/uniprot/Q17994 Q17994]
 
−
** [http://www.uniprot.org/uniprot/Q17983 Q17983]
 
−
** [http://www.uniprot.org/uniprot/Q22066 Q22066]
 
−
** [http://www.uniprot.org/uniprot/Q22067 Q22067]
 
−
** [http://www.uniprot.org/uniprot/O01804 O01804]
 
−
** [http://www.uniprot.org/uniprot/O54170 O54170]
 
−
** [http://www.uniprot.org/uniprot/O42652 O42652]
 
−
** [http://www.uniprot.org/uniprot/O94320 O94320]
 
−
** [http://www.uniprot.org/uniprot/P46644 P46644]
 
−
** [http://www.uniprot.org/uniprot/P00504 P00504]
 
−
** [http://www.uniprot.org/uniprot/P00508 P00508]
 
−
** [http://www.uniprot.org/uniprot/P00509 P00509]
 
−
** [http://www.uniprot.org/uniprot/P00505 P00505]
 
−
** [http://www.uniprot.org/uniprot/P00503 P00503]
 
−
** [http://www.uniprot.org/uniprot/P00506 P00506]
 
−
** [http://www.uniprot.org/uniprot/P26563 P26563]
 
−
</div>
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=aspartate transaminase|l-phenylalanine:2-oxoglutarate aminotransferase}}
 
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{{#set: ec-number=ec-2.6.1.1}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=9}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-7032

  • common-name:
    • 3-methylbutanol
  • smiles:
    • cc(cco)c
  • inchi-key:
    • phtqwckdnzkarw-uhfffaoysa-n
  • molecular-weight:
    • 88.149

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-7032&oldid=138662"